Nextflow Modules
Showing module(s) with keyword "model"
| Module | Keywords | Description |
|---|---|---|
| nf-core/amplify/predict | antimicrobial peptides AMPs prediction model | AMPlify is an attentive deep learning model for antimicrobial peptide prediction. |
| nf-core/caalm/downloadmodels | cazyme model download huggingface deep learning | Downloads the CAALM model weights from HuggingFace Hub (lczong/CAALM) into a local models/ directory. The downloaded directory is used as input to the CAALM_CAALM annotation module for CAZyme prediction. |
| nf-core/fungtion/downloadmodels | fungal effector protein prediction language model deep learning model download | Downloads the pretrained ESM-1b weights (esm1b_t33_650M_UR50S.pt) that fungtion uses for fungal effector prediction into a local models/ directory via `fungtion setup-models`. The downloaded directory is used as input to the FUNGTION_FUNGTION prediction module. |
| nf-core/huggingface/download | download gguf huggingface hub inference llm model | Download a file from a Hugging Face Hub repository using the `hf` CLI |