Nextflow Registry | nf-core/tcoffee/seqreformat@0.0.0-0c7146d

nf-core/tcoffee/seqreformat @ 0.0.0-0c7146d

Reformats files with t-coffee

reformatting alignment genomics

Latest version: 0.0.0-0c7146d

Total downloads: 1

Source: nf-core/modules

Authors: @luisas @JoseEspinosa

Reformats files with t-coffee

Add the following snippet to your workflow script to include this module.

include { TCOFFEE_SEQREFORMAT } from 'nf-core/tcoffee/seqreformat'

MIT License

Process

`Name`	`TCOFFEE_SEQREFORMAT`

Input 1 channel

#1 tuple

`meta` map	Groovy Map containing sample information e.g. `[ id:'test' ]`
`infile` file	Input file to be reformatted

Output 2 channels

#1 versions

`versions.yml` file	File containing software versions `versions.yml`

#2 formatted_file tuple

`meta` map	Groovy Map containing sample information e.g. `[ id:'test' ]`
`${prefix}.txt` file	Formatted file `*`

Tool	Description	Homepage
tcoffee	A collection of tools for Computing, Evaluating and Manipulating Multiple Alignments of DNA, RNA, Protein Sequences and Structures.	http://www.tcoffee.org/Projects/tcoffee/

Version	0.0.0-0c7146d
Commit ID	135d883a43b1a2324b4112cd270cf22e20835533
Release Date	08 Apr 2026 19:19:09 (UTC)
Download URL	https://registry-stage.nextflow.io/api/v1/modules/nf-core%2Ftcoffee%2Fseqreformat/0.0.0-0c7146d/download
OCI Store URL	https://public.cr.stage-seqera.io/v2/nextflow/plugin-stage/modules/nf-core/tcoffee/seqreformat/blobs/sha256:7e5df1aae05ea039f2567d2dcb17be50753c1ba80d76219dcff61119a3222e15
Size	2.3 KB
Checksum	sha256:7e5df1aae05ea039f2567d2dcb17be50753c1ba80d76219dcff61119a3222e15
Downloads	1

Version	Date	Status	Downloads	Size	Diff
0.0.0-0c7146d	08 Apr 2026 19:19:09 (UTC)		1	2.3 KB	-