Nextflow Registry | nf-core/skani/triangle@0.0.0-0c7146d

nf-core/skani/triangle @ 0.0.0-0c7146d

All-to-all ANI computation.

skani metagenomics genome alignment sketch distance dist

Latest version: 0.0.0-0c7146d

Total downloads: 1

Source: nf-core/modules

Authors: @CarsonJM

Maintainers: @CarsonJM

All-to-all ANI computation.

Add the following snippet to your workflow script to include this module.

include { SKANI_TRIANGLE } from 'nf-core/skani/triangle'

MIT License

Process

`Name`	`SKANI_TRIANGLE`

Input 1 channel

#1 tuple

`meta` map	Groovy Map containing sample information e.g. `[ id:'sample1' ]`
`queries` file	Space-separated list of FASTA(s)/skani sketch(es) to be used as query. `*.{fasta,fasta.gz,fa,fa.gz,fna,fna.gz,sketch}`

Output 2 channels

#1 triangle tuple

`meta` map	Groovy Map containing sample information e.g. `[ id:'sample1' ]`
`${prefix}.tsv` file	TSV file containing ANIs and AFs calculated between queries.

#2 versions

`versions.yml` file	File containing software versions `versions.yml`

Tool	Description	Homepage
skani	skani is a fast and robust tool for calculating ANI between metagenome assembled genomes and contigs.	https://github.com/bluenote-1577/skani

Version	0.0.0-0c7146d
Commit ID	135d883a43b1a2324b4112cd270cf22e20835533
Release Date	08 Apr 2026 19:14:54 (UTC)
Download URL	https://registry-stage.nextflow.io/api/v1/modules/nf-core%2Fskani%2Ftriangle/0.0.0-0c7146d/download
OCI Store URL	https://public.cr.stage-seqera.io/v2/nextflow/plugin-stage/modules/nf-core/skani/triangle/blobs/sha256:0cb25546a6430070537272610ad8eda795344d655abab5917f922f5f909cc634
Size	2.3 KB
Checksum	sha256:0cb25546a6430070537272610ad8eda795344d655abab5917f922f5f909cc634
Downloads	1

Version	Date	Status	Downloads	Size	Diff
0.0.0-0c7146d	08 Apr 2026 19:14:54 (UTC)		1	2.3 KB	-