nf-core/last/split @ 0.0.0-0c7146d
Summary
Find split or spliced alignments in a MAF file
Get started
Add the following snippet to your workflow script to include this module.
include { LAST_SPLIT } from 'nf-core/last/split'
License
MIT License
Name
|
LAST_SPLIT |
|---|
meta
map
|
Groovy Map containing sample information e.g. |
|---|---|
maf
file
|
Multiple Alignment Format (MAF) file, compressed with gzip *.{maf.gz}
|
maf
tuple
meta
map
|
Groovy Map containing sample information e.g. |
|---|---|
*.maf.gz
file
|
Multiple Alignment Format (MAF) file, compressed with gzip *.{maf.gz}
|
multiqc
tuple
meta
map
|
Groovy Map containing sample information e.g. |
|---|---|
*.tsv
file
|
Summary reporting the total alignment length (including gaps) and the percent identity computed with and without taking gaps in consideration (because there is no standard definition of percent identity). *.tsv
|
versions_last
tuple
${task.process}
string
|
The name of the process |
|---|---|
last
string
|
The name of the tool |
lastal --version | sed 's/lastal //'
eval
|
The expression to obtain the version of the tool |
| Tool | Description | Homepage |
|---|---|---|
| last | LAST finds & aligns related regions of sequences. | https://gitlab.com/mcfrith/last |
| Version | 0.0.0-0c7146d |
|---|---|
| Commit ID | 135d883a43b1a2324b4112cd270cf22e20835533 |
| Release Date | 08 Apr 2026 18:51:55 (UTC) |
| Download URL | https://registry-stage.nextflow.io/api/v1/modules/nf-core%2Flast%2Fsplit/0.0.0-0c7146d/download |
| OCI Store URL | https://public.cr.stage-seqera.io/v2/nextflow/plugin-stage/modules/nf-core/last/split/blobs/sha256:72cd3d7ee9aec78b69d5dc317b2db9ba1a9b51c8fdb26204f5d416e57f1384da |
| Size | 3.5 KB |
| Checksum | sha256:72cd3d7ee9aec78b69d5dc317b2db9ba1a9b51c8fdb26204f5d416e57f1384da |
| Downloads | 1 |
| Version | Date | Status | Downloads | Size | Diff |
|---|---|---|---|---|---|
| 0.0.0-0c7146d | 08 Apr 2026 18:51:55 (UTC) | 1 | 3.5 KB | - |