nf-core/diamond/cluster @ 0.0.0-0c7146d
Summary
calculate clusters of highly similar sequences
Get started
Add the following snippet to your workflow script to include this module.
include { DIAMOND_CLUSTER } from 'nf-core/diamond/cluster'
License
MIT License
Process
Name
|
DIAMOND_CLUSTER |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. |
|---|---|
db
file
|
The input sequence database. Supported formats are FASTA and DIAMOND (.dmnd) format. *.{dmnd,fa,faa,fasta}(.gz)
|
Output
2 channels
#1
tsv
tuple
meta
map
|
Groovy Map containing sample information e.g. |
|---|---|
*.tsv
file
|
a 2-column tabular file with the representative accession as the first column and the member sequence accession as the second column *.tsv
|
#2
versions_diamond
tuple
${task.process}
string
|
The name of the process |
|---|---|
diamond
string
|
The name of the tool |
diamond --version | sed 's/diamond version //g'
eval
|
The expression to obtain the version of the tool |
| Tool | Description | Homepage |
|---|---|---|
| diamond | Accelerated BLAST compatible local sequence aligner | https://github.com/bbuchfink/diamond/wiki |
| Version | 0.0.0-0c7146d |
|---|---|
| Commit ID | 135d883a43b1a2324b4112cd270cf22e20835533 |
| Release Date | 08 Apr 2026 18:36:03 (UTC) |
| Download URL | https://registry-stage.nextflow.io/api/v1/modules/nf-core%2Fdiamond%2Fcluster/0.0.0-0c7146d/download |
| OCI Store URL | https://public.cr.stage-seqera.io/v2/nextflow/plugin-stage/modules/nf-core/diamond/cluster/blobs/sha256:66f33d85586bcd149cac2169c874d3412326356733370cea05e19c70190aef61 |
| Size | 2.4 KB |
| Checksum | sha256:66f33d85586bcd149cac2169c874d3412326356733370cea05e19c70190aef61 |
| Downloads | 1 |
| Version | Date | Status | Downloads | Size | Diff |
|---|---|---|---|---|---|
| 0.0.0-0c7146d | 08 Apr 2026 18:36:03 (UTC) | 1 | 2.4 KB | - |