Nextflow Registry | nf-core/vrhyme/linkbins@0.0.0-0c7146d

nf-core/vrhyme/linkbins @ 0.0.0-0c7146d

Linking bins output by vRhyme to create one sequences per bin

bin binning link vrhyme linkbins

Latest version: 0.0.0-0c7146d

Total downloads: 1

Source: nf-core/modules

Authors: @CarsonJM

Maintainers: @CarsonJM

Linking bins output by vRhyme to create one sequences per bin

Add the following snippet to your workflow script to include this module.

include { VRHYME_LINKBINS } from 'nf-core/vrhyme/linkbins'

MIT License

Process

`Name`	`VRHYME_LINKBINS`

Input 1 channel

#1 tuple

`meta` map	Groovy Map containing sample information e.g. [ id:'test' ]
`bins` directory	Directory file containing bin FASTA files output by vRhyme (each bin having multiple sequences)

Output 2 channels

#1 versions

`versions.yml` file	File containing software versions `versions.yml`

#2 linked_bins tuple

`meta` map	Groovy Map containing sample information e.g. [ id:'test', single_end:false ]
`*_linked_bins.fasta` file	FASTA file containing all bins that have been linked by N's `*_linked_bins.fasta`

Tool	Description	Homepage
vrhyme	vRhyme functions by utilizing coverage variance comparisons and supervised machine learning classification of sequence features to construct viral metagenome-assembled genomes (vMAGs).	https://github.com/AnantharamanLab/vRhyme

Version	0.0.0-0c7146d
Commit ID	135d883a43b1a2324b4112cd270cf22e20835533
Release Date	08 Apr 2026 19:22:57 (UTC)
Download URL	https://registry-stage.nextflow.io/api/v1/modules/nf-core%2Fvrhyme%2Flinkbins/0.0.0-0c7146d/download
OCI Store URL	https://public.cr.stage-seqera.io/v2/nextflow/plugin-stage/modules/nf-core/vrhyme/linkbins/blobs/sha256:f204665c449a4e8f49ebe133c22714124b24a1f79eb0bff5cf79fbe9457284b6
Size	2.6 KB
Checksum	sha256:f204665c449a4e8f49ebe133c22714124b24a1f79eb0bff5cf79fbe9457284b6
Downloads	1

Version	Date	Status	Downloads	Size	Diff
0.0.0-0c7146d	08 Apr 2026 19:22:57 (UTC)		1	2.6 KB	-