nf-core/traitar/pfamget @ 0.0.0-e2d3f0d
Summary
Download PFAM database for traitar phenotype prediction
Get started
Add the following snippet to your workflow script to include this module.
include { TRAITAR_PFAMGET } from 'nf-core/traitar/pfamget'
License
MIT License
Process
Name
|
TRAITAR_PFAMGET |
|---|
Output
2 channels
#1
pfam_db
pfam_data
directory
|
PFAM database directory containing HMM profiles pfam_data
|
|---|
#2
versions_traitar
tuple
${task.process}
string
|
The name of the process |
|---|---|
traitar
string
|
The name of the tool |
traitar --version 2>&1 | tail -1
eval
|
The expression to obtain the version of the tool |
| Tool | Description | Homepage |
|---|---|---|
| traitar | Microbial trait prediction from genome sequences | https://github.com/hzi-bifo/traitar3 |
| Version | 0.0.0-e2d3f0d |
|---|---|
| Commit ID | e2d3f0ddf4a74a4a9031f3caea2e9deaec5a440b |
| Release Date | 28 Apr 2026 21:16:00 (UTC) |
| Download URL | https://registry-stage.nextflow.io/api/v1/modules/nf-core%2Ftraitar%2Fpfamget/0.0.0-e2d3f0d/download |
| OCI Store URL | https://public.cr.stage-seqera.io/v2/nextflow/plugin-stage/modules/nf-core/traitar/pfamget/blobs/sha256:4c71506f657a6adb6f6597f0c36255a6fd2559cfc838116eb31649539908b0e1 |
| Size | 2.0 KB |
| Checksum | sha256:4c71506f657a6adb6f6597f0c36255a6fd2559cfc838116eb31649539908b0e1 |
| Downloads | 1 |
| Version | Date | Status | Downloads | Size | Diff |
|---|---|---|---|---|---|
| 0.0.0-e2d3f0d | 28 Apr 2026 21:16:00 (UTC) | 1 | 2.0 KB | ↔ | |
| 0.0.0-0c7146d | 08 Apr 2026 19:19:46 (UTC) | 1 | 1.9 KB | - |