nf-core/svdb/build @ 0.0.0-0c7146d
Summary
Build a structural variant database
Get started
Add the following snippet to your workflow script to include this module.
include { SVDB_BUILD } from 'nf-core/svdb/build'
License
MIT License
Process
Name
|
SVDB_BUILD |
|---|
Input
2 channels
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
input
file
|
Input VCF file(s) or folder *
|
input_type
string
|
input type |
|---|
Output
2 channels
#1
db
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test' ] |
|---|---|
*.db
file
|
SVDB database |
#2
versions_svdb
tuple
${task.process}
string
|
The name of the process |
|---|---|
svdb
string
|
The name of the tool |
svdb | sed -nE 's/.*SVDB-([0-9.]+).*/\1/p'
eval
|
The expression to obtain the version of the tool |
| Tool | Description | Homepage |
|---|---|---|
| svdb | structural variant database software | https://github.com/J35P312/SVDB |
| Version | 0.0.0-0c7146d |
|---|---|
| Commit ID | 135d883a43b1a2324b4112cd270cf22e20835533 |
| Release Date | 08 Apr 2026 19:17:26 (UTC) |
| Download URL | https://registry-stage.nextflow.io/api/v1/modules/nf-core%2Fsvdb%2Fbuild/0.0.0-0c7146d/download |
| OCI Store URL | https://public.cr.stage-seqera.io/v2/nextflow/plugin-stage/modules/nf-core/svdb/build/blobs/sha256:2ffb42b20adf98127bde29ccd5ca31106d2d3a6291ec844c965261289b2b7377 |
| Size | 2.4 KB |
| Checksum | sha256:2ffb42b20adf98127bde29ccd5ca31106d2d3a6291ec844c965261289b2b7377 |
| Downloads | 1 |
| Version | Date | Status | Downloads | Size | Diff |
|---|---|---|---|---|---|
| 0.0.0-0c7146d | 08 Apr 2026 19:17:26 (UTC) | 1 | 2.4 KB | - |