Nextflow Registry | nf-core/sushie@0.0.0-071d7b4

nf-core/sushie @ 0.0.0-071d7b4

Software to perform multi-ancestry SNP fine-mapping on molecular data

gwas fine mapping ancestry

Latest version: 0.0.0-071d7b4

Total downloads: 1

Source: nf-core/modules

Authors: @camlloyd

Maintainers: @camlloyd

Software to perform multi-ancestry SNP fine-mapping on molecular data

Add the following snippet to your workflow script to include this module.

include { SUSHIE } from 'nf-core/sushie'

MIT License

Process

`Name`	`SUSHIE`

Input 3 channels

#1 tuple

`meta` map	Groovy Map containing sample information e.g. `[ id:'sample1' ]`
`study_locus_files` file	Study locus file(s) `*.gwas`

`ld_files` file	LD file(s) `*.ld`

`sample_sizes` string	Sample size(s)

Output 5 channels

#1 cs tuple

`meta` map	Groovy Map containing sample information e.g. `[ id:'sample1' ]`
`*.sushie.cs.tsv.gz` file	Credible set `*.sushie.cs.tsv.gz`

#2 log tuple

`meta` map	Groovy Map containing sample information e.g. `[ id:'sample1' ]`
`*.log` file	Log file `*.log`

#3 corr tuple

`meta` map	Groovy Map containing sample information e.g. `[ id:'sample1' ]`
`*.sushie.corr.tsv.gz` file	Effect size correlation `*.sushie.corr.tsv.gz`

#4 weights tuple

`meta` map	Groovy Map containing sample information e.g. `[ id:'sample1' ]`
`*.sushie.weights.tsv.gz` file	Prediction weights `*.sushie.weights.tsv.gz`

#5 versions_sushie tuple

`${task.process}` string	The name of the process
`sushie` string	The name of the tool
`0.19` string	The expression to obtain the version of the tool

Tool	Description	Homepage
sushie	Software to perform multi-ancestry SNP fine-mapping on molecular data	https://github.com/mancusolab/sushie/

Version	0.0.0-071d7b4
Commit ID	4e8e48c04e24c2159a5589a36bae0f038809cd48
Release Date	09 Apr 2026 21:15:52 (UTC)
Download URL	https://registry-stage.nextflow.io/api/v1/modules/nf-core%2Fsushie/0.0.0-071d7b4/download
OCI Store URL	https://public.cr.stage-seqera.io/v2/nextflow/plugin-stage/modules/nf-core/sushie/blobs/sha256:d556583e3f06e8a32ae2884346c0984cf4ce92a913711d2ab84ec953660dbb3f
Size	2.9 KB
Checksum	sha256:d556583e3f06e8a32ae2884346c0984cf4ce92a913711d2ab84ec953660dbb3f
Downloads	1

Version	Date	Status	Downloads	Size	Diff
0.0.0-071d7b4	09 Apr 2026 21:15:52 (UTC)		1	2.9 KB	-