nf-core/spring/compress @ 0.0.0-0c7146d
Summary
Fast, efficient, lossless compression of FASTQ files.
Get started
Add the following snippet to your workflow script to include this module.
include { SPRING_COMPRESS } from 'nf-core/spring/compress'
License
MIT License
Process
Name
|
SPRING_COMPRESS |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
fastq1
file
|
FASTQ file to compress. *.{fq.gz,fastq.gz}
|
fastq2
file
|
Parired FASTQ file fon non single-end experiments. *.{fq.gz,fastq.gz}
|
Output
2 channels
#1
spring
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
*.spring
file
|
One sequence file in spring compressed format. *.{spring}
|
#2
versions_spring
tuple
${task.process}
string
|
The name of the process |
|---|---|
spring
string
|
The name of the tool |
1.1.1
string
|
The expression to obtain the version of the tool |
| Tool | Description | Homepage |
|---|---|---|
| spring | SPRING is a compression tool for Fastq files (containing up to 4.29 Billion reads) | https://github.com/shubhamchandak94/Spring |
| Version | 0.0.0-0c7146d |
|---|---|
| Commit ID | 135d883a43b1a2324b4112cd270cf22e20835533 |
| Release Date | 08 Apr 2026 19:16:12 (UTC) |
| Download URL | https://registry-stage.nextflow.io/api/v1/modules/nf-core%2Fspring%2Fcompress/0.0.0-0c7146d/download |
| OCI Store URL | https://public.cr.stage-seqera.io/v2/nextflow/plugin-stage/modules/nf-core/spring/compress/blobs/sha256:219234370725fcfb9b937742f8886e990c91f594db71f7cdeff47a3e6dfcb1df |
| Size | 2.5 KB |
| Checksum | sha256:219234370725fcfb9b937742f8886e990c91f594db71f7cdeff47a3e6dfcb1df |
| Downloads | 1 |
| Version | Date | Status | Downloads | Size | Diff |
|---|---|---|---|---|---|
| 0.0.0-0c7146d | 08 Apr 2026 19:16:12 (UTC) | 1 | 2.5 KB | - |