nf-core/snpsift/split @ 0.0.0-0c7146d
Summary
Splits/Joins VCF(s) file into chromosomes
Get started
Add the following snippet to your workflow script to include this module.
include { SNPSIFT_SPLIT } from 'nf-core/snpsift/split'
License
MIT License
Process
Name
|
SNPSIFT_SPLIT |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
vcf
file
|
VCF file(s) *.{vcf,vcf.gz}
|
Output
2 channels
#1
out_vcfs
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
*.vcf
file
|
Split/Joined VCF file(s) *.vcf
|
#2
versions
versions.yml
file
|
File containing software versions versions.yml
|
|---|
| Tool | Description | Homepage |
|---|---|---|
| snpsift | SnpSift is a toolbox that allows you to filter and manipulate annotated files | https://pcingola.github.io/SnpEff/ss_introduction/ |
| Version | 0.0.0-0c7146d |
|---|---|
| Commit ID | 135d883a43b1a2324b4112cd270cf22e20835533 |
| Release Date | 08 Apr 2026 19:15:33 (UTC) |
| Download URL | https://registry-stage.nextflow.io/api/v1/modules/nf-core%2Fsnpsift%2Fsplit/0.0.0-0c7146d/download |
| OCI Store URL | https://public.cr.stage-seqera.io/v2/nextflow/plugin-stage/modules/nf-core/snpsift/split/blobs/sha256:878e874c7e6a76e2c70a91541256a2f8a2b2b3db8001cd9124fccba12d9d6273 |
| Size | 2.6 KB |
| Checksum | sha256:878e874c7e6a76e2c70a91541256a2f8a2b2b3db8001cd9124fccba12d9d6273 |
| Downloads | 1 |
| Version | Date | Status | Downloads | Size | Diff |
|---|---|---|---|---|---|
| 0.0.0-0c7146d | 08 Apr 2026 19:15:33 (UTC) | 1 | 2.6 KB | - |