nf-core/snpeff/download @ 0.0.0-0c7146d
Summary
Genetic variant annotation and functional effect prediction toolbox
Get started
Add the following snippet to your workflow script to include this module.
include { SNPEFF_DOWNLOAD } from 'nf-core/snpeff/download'
License
MIT License
Process
Name
|
SNPEFF_DOWNLOAD |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
snpeff_db
string
|
SnpEff database name |
Output
2 channels
#1
cache
tuple
meta
file
|
snpEff cache |
|---|---|
snpeff_cache
file
|
snpEff cache |
#2
versions_snpeff
tuple
${task.process}
string
|
The process the versions were collected from |
|---|---|
snpeff
string
|
The tool name |
snpEff -version 2>&1 | cut -f 2 -d ' '
string
|
The command used to generate the version of the tool |
| Tool | Description | Homepage |
|---|---|---|
| snpeff | SnpEff is a variant annotation and effect prediction tool. It annotates and predicts the effects of genetic variants on genes and proteins (such as amino acid changes). | https://pcingola.github.io/SnpEff/ |
| Version | 0.0.0-0c7146d |
|---|---|
| Commit ID | 135d883a43b1a2324b4112cd270cf22e20835533 |
| Release Date | 08 Apr 2026 19:15:22 (UTC) |
| Download URL | https://registry-stage.nextflow.io/api/v1/modules/nf-core%2Fsnpeff%2Fdownload/0.0.0-0c7146d/download |
| OCI Store URL | https://public.cr.stage-seqera.io/v2/nextflow/plugin-stage/modules/nf-core/snpeff/download/blobs/sha256:28b514c9939cb1d5e00f3d138f0866b2aeddfd445a673b7321492dee4563f060 |
| Size | 2.4 KB |
| Checksum | sha256:28b514c9939cb1d5e00f3d138f0866b2aeddfd445a673b7321492dee4563f060 |
| Downloads | 1 |
| Version | Date | Status | Downloads | Size | Diff |
|---|---|---|---|---|---|
| 0.0.0-0c7146d | 08 Apr 2026 19:15:22 (UTC) | 1 | 2.4 KB | - |