nf-core/rbt/vcfsplit @ 0.0.0-0c7146d
Summary
A tool for splitting VCF/BCF files into N equal chunks, including BND support
Get started
Add the following snippet to your workflow script to include this module.
include { RBT_VCFSPLIT } from 'nf-core/rbt/vcfsplit'
License
MIT License
Process
Name
|
RBT_VCFSPLIT |
|---|
Input
2 channels
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. |
|---|---|
vcf
file
|
VCF file with variants to be split *.{vcf,bcf,vcf.gz}
|
numchunks
integer
|
Number of chunks to split the VCF file into. The default is 15. |
|---|
Output
2 channels
#1
bcfchunks
tuple
meta
map
|
Groovy Map containing sample information e.g. |
|---|---|
*.bcf
file
|
Chunks of the input VCF file, split into *.bcf
|
#2
versions_rbt
tuple
${task.process}
string
|
The process the versions were collected from |
|---|---|
rbt
string
|
The tool name |
rbt --version | grep -oE '[0-9]+(\.[0-9]+)+' | head -n 1
eval
|
The expression to obtain the version of the tool |
| Tool | Description | Homepage |
|---|---|---|
| rust-bio-tools | A growing collection of fast and secure command line utilities for dealing with NGS data implemented on top of Rust-Bio. | https://github.com/rust-bio/rust-bio-tools |
| Version | 0.0.0-0c7146d |
|---|---|
| Commit ID | 135d883a43b1a2324b4112cd270cf22e20835533 |
| Release Date | 08 Apr 2026 19:07:08 (UTC) |
| Download URL | https://registry-stage.nextflow.io/api/v1/modules/nf-core%2Frbt%2Fvcfsplit/0.0.0-0c7146d/download |
| OCI Store URL | https://public.cr.stage-seqera.io/v2/nextflow/plugin-stage/modules/nf-core/rbt/vcfsplit/blobs/sha256:988c4e3f3b8c66f4875b02cd09c878b878b7ea31f15810e7a963dd90bc2287a3 |
| Size | 2.6 KB |
| Checksum | sha256:988c4e3f3b8c66f4875b02cd09c878b878b7ea31f15810e7a963dd90bc2287a3 |
| Downloads | 1 |
| Version | Date | Status | Downloads | Size | Diff |
|---|---|---|---|---|---|
| 0.0.0-0c7146d | 08 Apr 2026 19:07:08 (UTC) | 1 | 2.6 KB | - |