Nextflow Registry | nf-core/presto/filterseq@0.0.0-0c7146d

nf-core/presto/filterseq @ 0.0.0-0c7146d

Filter reads by quality score.

immcantation airrseq genomics immunoinformatics

Latest version: 0.0.0-0c7146d

Total downloads: 1

Source: nf-core/modules

Authors: @ggabernet

Filter reads by quality score.

Add the following snippet to your workflow script to include this module.

include { PRESTO_FILTERSEQ } from 'nf-core/presto/filterseq'

MIT License

Process

`Name`	`PRESTO_FILTERSEQ`

Input 1 channel

#1 tuple

`meta` map	Groovy Map containing sample information e.g. `[ id:'test', single_end:false ]`
`reads` file	fastq file `*.{fastq}`

Output 4 channels

#1 logs

`*_command_log.txt` file	command logs `*.txt`

#2 reads tuple

`meta` map	Groovy Map containing sample information e.g. `[ id:'test', single_end:false ]`
`*_quality-pass.fastq` file	filtered fastq file `*.{fastq}`

#3 log_tab

`*.tab` file	parsed log table `*.tab`

#4 versions

`versions.yml` file	File containing software versions `versions.yml`

Tool	Description	Homepage
presto	A bioinformatics toolkit for processing high-throughput lymphocyte receptor sequencing data.	https://immcantation.readthedocs.io

Version	0.0.0-0c7146d
Commit ID	135d883a43b1a2324b4112cd270cf22e20835533
Release Date	08 Apr 2026 19:05:08 (UTC)
Download URL	https://registry-stage.nextflow.io/api/v1/modules/nf-core%2Fpresto%2Ffilterseq/0.0.0-0c7146d/download
OCI Store URL	https://public.cr.stage-seqera.io/v2/nextflow/plugin-stage/modules/nf-core/presto/filterseq/blobs/sha256:26c91888ab593312787128dabae568886841d427b9eda5dff2db6529e688345f
Size	2.5 KB
Checksum	sha256:26c91888ab593312787128dabae568886841d427b9eda5dff2db6529e688345f
Downloads	1

Version	Date	Status	Downloads	Size	Diff
0.0.0-0c7146d	08 Apr 2026 19:05:08 (UTC)		1	2.5 KB	-