nf-core/preseq/ccurve @ 0.0.0-0c7146d
Summary
Software for predicting library complexity and genome coverage in high-throughput sequencing
Get started
Add the following snippet to your workflow script to include this module.
include { PRESEQ_CCURVE } from 'nf-core/preseq/ccurve'
License
MIT License
Process
Name
|
PRESEQ_CCURVE |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
bam
file
|
BAM/CRAM/SAM file *.{bam,cram,sam}
|
Output
3 channels
#1
log
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
*.log
file
|
Log file containing stderr produced by Preseq *.{log}
|
#2
c_curve
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
*.c_curve.txt
file
|
Preseq c_curve output file *.{c_curve.txt}
|
#3
versions
versions.yml
file
|
File containing software versions versions.yml
|
|---|
| Tool | Description | Homepage |
|---|---|---|
| preseq | Software for predicting library complexity and genome coverage in high-throughput sequencing | http://smithlabresearch.org/software/preseq/ |
| Version | 0.0.0-0c7146d |
|---|---|
| Commit ID | 135d883a43b1a2324b4112cd270cf22e20835533 |
| Release Date | 08 Apr 2026 19:05:03 (UTC) |
| Download URL | https://registry-stage.nextflow.io/api/v1/modules/nf-core%2Fpreseq%2Fccurve/0.0.0-0c7146d/download |
| OCI Store URL | https://public.cr.stage-seqera.io/v2/nextflow/plugin-stage/modules/nf-core/preseq/ccurve/blobs/sha256:b8363f6b0afcd0bb4fae373326117a5cd22cb7a454052b4d168eb6cc311b9f88 |
| Size | 2.5 KB |
| Checksum | sha256:b8363f6b0afcd0bb4fae373326117a5cd22cb7a454052b4d168eb6cc311b9f88 |
| Downloads | 1 |
| Version | Date | Status | Downloads | Size | Diff |
|---|---|---|---|---|---|
| 0.0.0-0c7146d | 08 Apr 2026 19:05:03 (UTC) | 1 | 2.5 KB | - |