nf-core/picard/createsequencedictionary @ 0.0.0-0c7146d
Summary
Creates a sequence dictionary for a reference sequence.
Get started
Add the following snippet to your workflow script to include this module.
include { PICARD_CREATESEQUENCEDICTIONARY } from 'nf-core/picard/createsequencedictionary'
License
MIT License
Process
Name
|
PICARD_CREATESEQUENCEDICTIONARY |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
fasta
file
|
The reference fasta file *.fasta
|
Output
2 channels
#1
reference_dict
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
*.dict
file
|
picard dictionary file *.{dict}
|
#2
versions_picard
tuple
${task.process}
string
|
The process the versions were collected from |
|---|---|
picard
string
|
The tool name |
picard CreateSequenceDictionary --version 2>&1 | sed -n 's/.*Version://p'
string
|
The command used to generate the version of the tool |
| Tool | Description | Homepage |
|---|---|---|
| picard | Creates a sequence dictionary file (with ".dict" extension) from a reference sequence provided in FASTA format, which is required by many processing and analysis tools. The output file contains a header but no SAMRecords, and the header contains only sequence records. | https://broadinstitute.github.io/picard/ |
| Version | 0.0.0-0c7146d |
|---|---|
| Commit ID | 135d883a43b1a2324b4112cd270cf22e20835533 |
| Release Date | 08 Apr 2026 19:02:39 (UTC) |
| Download URL | https://registry-stage.nextflow.io/api/v1/modules/nf-core%2Fpicard%2Fcreatesequencedictionary/0.0.0-0c7146d/download |
| OCI Store URL | https://public.cr.stage-seqera.io/v2/nextflow/plugin-stage/modules/nf-core/picard/createsequencedictionary/blobs/sha256:b8e210cfa510841dd5189ba10812a27f45a195c9dac78f704ca8a54eb280cf3a |
| Size | 2.6 KB |
| Checksum | sha256:b8e210cfa510841dd5189ba10812a27f45a195c9dac78f704ca8a54eb280cf3a |
| Downloads | 1 |
| Version | Date | Status | Downloads | Size | Diff |
|---|---|---|---|---|---|
| 0.0.0-0c7146d | 08 Apr 2026 19:02:39 (UTC) | 1 | 2.6 KB | - |