Nextflow Registry | nf-core/openms/idmassaccuracy@0.0.0-0c7146d

nf-core/openms/idmassaccuracy @ 0.0.0-0c7146d

Calculates a distribution of the mass error from given mass spectra and IDs.

mass_error openms proteomics

Latest version: 0.0.0-0c7146d

Total downloads: 1

Source: nf-core/modules

Authors: @jonasscheid

Calculates a distribution of the mass error from given mass spectra and IDs.

Add the following snippet to your workflow script to include this module.

include { OPENMS_IDMASSACCURACY } from 'nf-core/openms/idmassaccuracy'

MIT License

Process

`Name`	`OPENMS_IDMASSACCURACY`

Input 1 channel

#1 tuple

`meta` map	Groovy Map containing sample information e.g. `[ id:'test' ]`
`mzmls` file	List containing one or more mzML files e.g. `[ 'file1.mzML', 'file2.mzML' ]` `*.{mzML}`
`idxmls` file	List containing one or more idXML files e.g. `[ 'file1.idXML', 'file2.idXML' ]` `*.{idXML}`

Output 3 channels

#1 frag_err tuple

`meta` map	Groovy Map containing sample information e.g. `[ id:'test' ]`
`*frag_mass_err.tsv` file	TSV file containing the fragment mass errors `*frag_mass_err.{tsv}`

#2 prec_err tuple

`meta` map	Groovy Map containing sample information e.g. `[ id:'test' ]`
`*prec_mass_err.tsv` file	Optional TSV file containing the precursor mass errors `*prec_mass_err.{tsv}`

#3 versions

`versions.yml` file	File containing software versions `versions.yml`

Tool	Description	Homepage
openms	OpenMS is an open-source software C++ library for LC-MS data management and analyses	https://openms.de

Version	0.0.0-0c7146d
Commit ID	135d883a43b1a2324b4112cd270cf22e20835533
Release Date	08 Apr 2026 18:59:46 (UTC)
Download URL	https://registry-stage.nextflow.io/api/v1/modules/nf-core%2Fopenms%2Fidmassaccuracy/0.0.0-0c7146d/download
OCI Store URL	https://public.cr.stage-seqera.io/v2/nextflow/plugin-stage/modules/nf-core/openms/idmassaccuracy/blobs/sha256:fa76fa2a46110efa2e3505b9259f0f2d6d227770124fd6b50009eb8e866c83ac
Size	3.1 KB
Checksum	sha256:fa76fa2a46110efa2e3505b9259f0f2d6d227770124fd6b50009eb8e866c83ac
Downloads	1

Version	Date	Status	Downloads	Size	Diff
0.0.0-0c7146d	08 Apr 2026 18:59:46 (UTC)		1	3.1 KB	-