Nextflow Registry | nf-core/openms/decoydatabase@0.0.0-0c7146d

nf-core/openms/decoydatabase @ 0.0.0-0c7146d

Create a decoy peptide database from a standard FASTA database.

decoy database openms proteomics fasta

Latest version: 0.0.0-0c7146d

Total downloads: 1

Source: nf-core/modules

Authors: @jonasscheid

Maintainers: @jonasscheid @gallvp

Create a decoy peptide database from a standard FASTA database.

Add the following snippet to your workflow script to include this module.

include { OPENMS_DECOYDATABASE } from 'nf-core/openms/decoydatabase'

MIT License

Process

`Name`	`OPENMS_DECOYDATABASE`

Input 1 channel

#1 tuple

`meta` map	Groovy Map containing sample information e.g. `[ id:'test', single_end:false ]`
`fasta` file	Fasta file containing protein sequences `*.{fasta}`

Output 2 channels

#1 decoy_fasta tuple

`meta` map	Groovy Map containing sample information e.g. `[ id:'test', single_end:false ]`
`*.fasta` file	Fasta file containing proteins and decoy proteins `*.{fasta}`

#2 versions_openms tuple

`${task.process}` string	The process the versions were collected from
`openms` string	The tool name
`FileInfo --help 2>&1 \| sed -nE 's/^Version: ([0-9.]+).*/\1/p'` eval	The expression to obtain the version of the tool

Tool	Description	Homepage
openms	OpenMS is an open-source software C++ library for LC-MS data management and analyses	https://openms.de

Version	0.0.0-0c7146d
Commit ID	135d883a43b1a2324b4112cd270cf22e20835533
Release Date	08 Apr 2026 18:59:40 (UTC)
Download URL	https://registry-stage.nextflow.io/api/v1/modules/nf-core%2Fopenms%2Fdecoydatabase/0.0.0-0c7146d/download
OCI Store URL	https://public.cr.stage-seqera.io/v2/nextflow/plugin-stage/modules/nf-core/openms/decoydatabase/blobs/sha256:099ee5010b892e389df2588421cae5eaccdce4f17fac80c36ded1692d070b4c8
Size	2.2 KB
Checksum	sha256:099ee5010b892e389df2588421cae5eaccdce4f17fac80c36ded1692d070b4c8
Downloads	1

Version	Date	Status	Downloads	Size	Diff
0.0.0-0c7146d	08 Apr 2026 18:59:40 (UTC)		1	2.2 KB	-