Nextflow Registry | nf-core/odgi/viz@0.0.0-0c7146d

nf-core/odgi/viz @ 0.0.0-0c7146d

Visualize a variation graph in 1D.

variation graph pangenome graph gfa graph viz

Latest version: 0.0.0-0c7146d

Total downloads: 1

Source: nf-core/modules

Authors: @subwaystation

Maintainers: @subwaystation

Visualize a variation graph in 1D.

Add the following snippet to your workflow script to include this module.

include { ODGI_VIZ } from 'nf-core/odgi/viz'

MIT License

Process

`Name`	`ODGI_VIZ`

Input 1 channel

#1 tuple

`meta` map	Groovy Map containing sample information e.g. [ id:'test', single_end:false ]
`graph` file	Pangenome graph in binary ODGI or in GFA v1.0 format `*.{og,gfa}`

Output 2 channels

#1 png tuple

`meta` map	Groovy Map containing sample information e.g. [ id:'test', single_end:false ]
`*.png` file	A 1D visualization of a pangenome graph. `*.{png}`

#2 versions

`versions.yml` file	File containing software versions `versions.yml`

Tool	Description	Homepage
odgi	An optimized dynamic genome/graph implementation	https://github.com/pangenome/odgi

Version	0.0.0-0c7146d
Commit ID	135d883a43b1a2324b4112cd270cf22e20835533
Release Date	08 Apr 2026 18:59:36 (UTC)
Download URL	https://registry-stage.nextflow.io/api/v1/modules/nf-core%2Fodgi%2Fviz/0.0.0-0c7146d/download
OCI Store URL	https://public.cr.stage-seqera.io/v2/nextflow/plugin-stage/modules/nf-core/odgi/viz/blobs/sha256:794d5a56e65d4b80d1af9afea4d3af474cec42e51609309ca0075790de2b8612
Size	2.1 KB
Checksum	sha256:794d5a56e65d4b80d1af9afea4d3af474cec42e51609309ca0075790de2b8612
Downloads	1

Version	Date	Status	Downloads	Size	Diff
0.0.0-0c7146d	08 Apr 2026 18:59:36 (UTC)		1	2.1 KB	-