Nextflow Registry | nf-core/odgi/unchop@0.0.0-0c7146d

nf-core/odgi/unchop @ 0.0.0-0c7146d

Merge unitigs into a single node preserving the node order.

variation graph pangenome graph gfa graph unchopping

Latest version: 0.0.0-0c7146d

Total downloads: 1

Source: nf-core/modules

Authors: @subwaystation

Maintainers: @subwaystation

Merge unitigs into a single node preserving the node order.

Add the following snippet to your workflow script to include this module.

include { ODGI_UNCHOP } from 'nf-core/odgi/unchop'

MIT License

Process

`Name`	`ODGI_UNCHOP`

Input 1 channel

#1 tuple

`meta` map	Groovy Map containing sample information e.g. [ id:'test', single_end:false ]
`graph` file	Pangenome graph in GFA v1.0 format or in ODGI binary format `*.{gfa,og}`

Output 2 channels

#1 versions

`versions.yml` file	File containing software versions `versions.yml`

#2 unchopped_graph tuple

`meta` map	Groovy Map containing sample information e.g. [ id:'test', single_end:false ]
`*.og` file	Unchopped pangenome graph in ODGI binary format `*.{og}`

Tool	Description	Homepage
odgi	An optimized dynamic genome/graph implementation	https://github.com/pangenome/odgi

Version	0.0.0-0c7146d
Commit ID	135d883a43b1a2324b4112cd270cf22e20835533
Release Date	08 Apr 2026 18:59:32 (UTC)
Download URL	https://registry-stage.nextflow.io/api/v1/modules/nf-core%2Fodgi%2Funchop/0.0.0-0c7146d/download
OCI Store URL	https://public.cr.stage-seqera.io/v2/nextflow/plugin-stage/modules/nf-core/odgi/unchop/blobs/sha256:fedd5456f294bdd6a55b4535260be1f70ff95c2c8de785ed5b736f26f2268118
Size	2.1 KB
Checksum	sha256:fedd5456f294bdd6a55b4535260be1f70ff95c2c8de785ed5b736f26f2268118
Downloads	1

Version	Date	Status	Downloads	Size	Diff
0.0.0-0c7146d	08 Apr 2026 18:59:32 (UTC)		1	2.1 KB	-