Nextflow Registry | nf-core/nanolyse@0.0.0-0c7146d

nf-core/nanolyse @ 0.0.0-0c7146d

DNA contaminant removal using NanoLyse

contaminant removal dna

Latest version: 0.0.0-0c7146d

Total downloads: 1

Source: nf-core/modules

Authors: @yuukiiwa

Maintainers: @yuukiiwa

DNA contaminant removal using NanoLyse

Add the following snippet to your workflow script to include this module.

include { NANOLYSE } from 'nf-core/nanolyse'

MIT License

Process

`Name`	`NANOLYSE`

Input 2 channels

#1 tuple

`meta` map	Groovy Map containing sample information e.g. [ id:'test', single_end:false ]
`fastq` file	Basecalled reads in FASTQ.GZ format `*.fastq.gz`

`fasta` file	A reference fasta file against which to filter. `*.fasta`

Output 3 channels

#1 log

`*.log` file	Log of the Nanolyse run. `*.log`

#2 fastq tuple

`meta` map	Groovy Map containing sample information e.g. [ id:'test', single_end:false ]
`*.fastq.gz` file	Reads with contaminants removed in FASTQ format `*.fastq.gz`

#3 versions

`versions.yml` file	File containing software versions `versions.yml`

Tool	Description	Homepage
nanolyse	DNA contaminant removal using NanoLyse	https://github.com/wdecoster/nanolyse

Version	0.0.0-0c7146d
Commit ID	135d883a43b1a2324b4112cd270cf22e20835533
Release Date	08 Apr 2026 18:58:26 (UTC)
Download URL	https://registry-stage.nextflow.io/api/v1/modules/nf-core%2Fnanolyse/0.0.0-0c7146d/download
OCI Store URL	https://public.cr.stage-seqera.io/v2/nextflow/plugin-stage/modules/nf-core/nanolyse/blobs/sha256:10b2001f8ee7fd0b809cf9374b93686f1b39c71c854ef61ad516c0fbe61f8cc6
Size	2.4 KB
Checksum	sha256:10b2001f8ee7fd0b809cf9374b93686f1b39c71c854ef61ad516c0fbe61f8cc6
Downloads	1

Version	Date	Status	Downloads	Size	Diff
0.0.0-0c7146d	08 Apr 2026 18:58:26 (UTC)		1	2.4 KB	-