Nextflow Registry | nf-core/mmseqs/cluster@0.0.0-0c7146d

nf-core/mmseqs/cluster @ 0.0.0-0c7146d

Cluster sequences using MMSeqs2 cluster.

Latest version: 0.0.0-0c7146d

Total downloads: 1

Source: nf-core/modules

Authors: @Joon-Klaps

Maintainers: @Joon-Klaps

Cluster sequences using MMSeqs2 cluster.

Add the following snippet to your workflow script to include this module.

include { MMSEQS_CLUSTER } from 'nf-core/mmseqs/cluster'

MIT License

Process

`Name`	`MMSEQS_CLUSTER`

Input 1 channel

#1 tuple

`meta` map	Groovy Map containing sample information e.g. `[ id:'test', single_end:false ]`
`db_input` file	Input database

Output 2 channels

#1 db_cluster tuple

`meta` map	Groovy Map containing sample information e.g. `[ id:'test', single_end:false ]`
`${prefix}/` file	a clustered MMseqs2 database used for clustering

#2 versions_mmseqs tuple

`${task.process}` string	The name of the process
`mmseqs` string	The name of the tool
`mmseqs version` eval	The expression to obtain the version of the tool

Tool	Description	Homepage
mmseqs	MMseqs2: ultra fast and sensitive sequence search and clustering suite	https://github.com/soedinglab/MMseqs2

Version	0.0.0-0c7146d
Commit ID	135d883a43b1a2324b4112cd270cf22e20835533
Release Date	08 Apr 2026 18:56:23 (UTC)
Download URL	https://registry-stage.nextflow.io/api/v1/modules/nf-core%2Fmmseqs%2Fcluster/0.0.0-0c7146d/download
OCI Store URL	https://public.cr.stage-seqera.io/v2/nextflow/plugin-stage/modules/nf-core/mmseqs/cluster/blobs/sha256:6a0a4375d3cff77751c48fcdbf6d612db56a46b9d1d33ffe14f31f68bdea256d
Size	2.8 KB
Checksum	sha256:6a0a4375d3cff77751c48fcdbf6d612db56a46b9d1d33ffe14f31f68bdea256d
Downloads	1

Version	Date	Status	Downloads	Size	Diff
0.0.0-0c7146d	08 Apr 2026 18:56:23 (UTC)		1	2.8 KB	-