nf-core/methyldackel/mbias @ 0.0.0-0c7146d
Summary
Generates methylation bias plots from alignments
Get started
Add the following snippet to your workflow script to include this module.
include { METHYLDACKEL_MBIAS } from 'nf-core/methyldackel/mbias'
License
MIT License
Process
Name
|
METHYLDACKEL_MBIAS |
|---|
Input
4 channels
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
bam
file
|
BAM/CRAM file *.{bam,cram}
|
#2
tuple
meta2
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
bai
file
|
BAM/CRAM index file *.{bai,crai}
|
#3
tuple
meta3
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
fasta
file
|
Input genome fasta file *.{fasta,fa}
|
#4
tuple
meta4
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
fai
file
|
FASTA index file *.{fai}
|
Output
2 channels
#1
txt
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
*.mbias.txt
file
|
Text file containing methylation bias *.{txt}
|
#2
versions
versions.yml
file
|
File containing software versions versions.yml
|
|---|
| Tool | Description | Homepage |
|---|---|---|
| methyldackel | Read position methylation bias tools from MethylDackel, a (mostly) universal extractor for methyl-seq experiments. | https://github.com/dpryan79/MethylDackel |
| Version | 0.0.0-0c7146d |
|---|---|
| Commit ID | 135d883a43b1a2324b4112cd270cf22e20835533 |
| Release Date | 08 Apr 2026 18:55:35 (UTC) |
| Download URL | https://registry-stage.nextflow.io/api/v1/modules/nf-core%2Fmethyldackel%2Fmbias/0.0.0-0c7146d/download |
| OCI Store URL | https://public.cr.stage-seqera.io/v2/nextflow/plugin-stage/modules/nf-core/methyldackel/mbias/blobs/sha256:43cfb621816f6d6215d0ad163b51081f701e294f16bf49b1372a1067fa9f6306 |
| Size | 2.4 KB |
| Checksum | sha256:43cfb621816f6d6215d0ad163b51081f701e294f16bf49b1372a1067fa9f6306 |
| Downloads | 1 |
| Version | Date | Status | Downloads | Size | Diff |
|---|---|---|---|---|---|
| 0.0.0-0c7146d | 08 Apr 2026 18:55:35 (UTC) | 1 | 2.4 KB | - |