Nextflow Registry | nf-core/metabuli/build@0.0.0-0c7146d

nf-core/metabuli/build @ 0.0.0-0c7146d

Builds a database for classification with metabuli from FASTA files and a taxonomy

Latest version: 0.0.0-0c7146d

Total downloads: 1

Source: nf-core/modules

Authors: @pawelciurkaardigen @MichalStachowiakArdigen @sofstam

Maintainers: @pawelciurkaardigen @MichalStachowiakArdigen @softam

Builds a database for classification with metabuli from FASTA files and a taxonomy

Add the following snippet to your workflow script to include this module.

include { METABULI_BUILD } from 'nf-core/metabuli/build'

MIT License

Process

`Name`	`METABULI_BUILD`

Input 6 channels

#1 tuple

`meta` map	Groovy Map containing sample information
`fasta` file	List of fasta files with input assemblies

`taxonomy_names` file	File describing individual members of a taxonomic tree in NCBI nodes.dmp format

`taxonomy_nodes` file	File describing parent-child relationships of a taxonomic tree in NCBI nodes.dmp format

`taxonomy_merged` file	Optional input to map old/deprecated TaxID to new ones

`accession2taxid` directory	TSV file (with no header) of first column with mapping accession (from first part of each fasta entry) and second column the corresponding TaxID

`cds_info` file	List of files to cds files

Output 2 channels

#1 db tuple

`meta` map	Groovy Map containing sample information
`$prefix` directory	metabuli database directory for classification

#2 versions_metabuli tuple

`${task.process}` string	The name of the process
`metabuli` string	The name of the tool
`metabuli 2>&1 \| awk '/metabuli Version:/ {print $3}'` eval	The expression to obtain the version of the tool

Tool	Description	Homepage
metabuli	Metabuli: specific and sensitive metagenomic classification via joint analysis of DNA and amino acid	https://github.com/steineggerlab/Metabuli

Version	0.0.0-0c7146d
Commit ID	135d883a43b1a2324b4112cd270cf22e20835533
Release Date	08 Apr 2026 18:55:06 (UTC)
Download URL	https://registry-stage.nextflow.io/api/v1/modules/nf-core%2Fmetabuli%2Fbuild/0.0.0-0c7146d/download
OCI Store URL	https://public.cr.stage-seqera.io/v2/nextflow/plugin-stage/modules/nf-core/metabuli/build/blobs/sha256:0b90091f98f84a9fa74a7b460a9a62b814633859b3a380c53f8cfa2cc02ecfcb
Size	3.2 KB
Checksum	sha256:0b90091f98f84a9fa74a7b460a9a62b814633859b3a380c53f8cfa2cc02ecfcb
Downloads	1

Version	Date	Status	Downloads	Size	Diff
0.0.0-0c7146d	08 Apr 2026 18:55:06 (UTC)		1	3.2 KB	-