nf-core/krona/ktupdatetaxonomy @ 0.0.0-0c7146d
Summary
KronaTools Update Taxonomy downloads a taxonomy database
Get started
Add the following snippet to your workflow script to include this module.
include { KRONA_KTUPDATETAXONOMY } from 'nf-core/krona/ktupdatetaxonomy'
License
MIT License
Process
Name
|
KRONA_KTUPDATETAXONOMY |
|---|
Output
2 channels
#1
db
taxonomy/taxonomy.tab
file
|
A TAB separated file that contains a taxonomy database. *.{tab}
|
|---|
#2
versions_krona
tuple
${task.process}
string
|
The name of the process |
|---|---|
krona
string
|
The name of the tool |
ktImportTaxonomy | grep -Po '(?<=KronaTools )[0-9.]+'
eval
|
The expression to obtain the version of the tool |
| Tool | Description | Homepage |
|---|---|---|
| krona | Krona Tools is a set of scripts to create Krona charts from several Bioinformatics tools as well as from text and XML files. | https://github.com/marbl/Krona/wiki/KronaTools |
| Version | 0.0.0-0c7146d |
|---|---|
| Commit ID | 135d883a43b1a2324b4112cd270cf22e20835533 |
| Release Date | 08 Apr 2026 18:51:42 (UTC) |
| Download URL | https://registry-stage.nextflow.io/api/v1/modules/nf-core%2Fkrona%2Fktupdatetaxonomy/0.0.0-0c7146d/download |
| OCI Store URL | https://public.cr.stage-seqera.io/v2/nextflow/plugin-stage/modules/nf-core/krona/ktupdatetaxonomy/blobs/sha256:bf0ff410e1585d084e92460aadf2334c2970ac9afa5c7e47b9413d6c8868d895 |
| Size | 2.1 KB |
| Checksum | sha256:bf0ff410e1585d084e92460aadf2334c2970ac9afa5c7e47b9413d6c8868d895 |
| Downloads | 1 |
| Version | Date | Status | Downloads | Size | Diff |
|---|---|---|---|---|---|
| 0.0.0-0c7146d | 08 Apr 2026 18:51:42 (UTC) | 1 | 2.1 KB | - |