nf-core/knotannotsv @ 0.0.0-071d7b4
Summary
Simple tool to create a customizable html file (to be displayed on a web browser) from an AnnotSV output
Get started
Add the following snippet to your workflow script to include this module.
include { KNOTANNOTSV } from 'nf-core/knotannotsv'
License
MIT License
Process
Name
|
KNOTANNOTSV |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. |
|---|---|
annotsv_tsv
file
|
Annotated TSV produced by AnnotSV *.tsv
|
knot_out_xl
boolean
|
Specify 'true' to output as XLSM (rather than HTML by default) |
Output
3 channels
#1
xl
tuple
meta
map
|
Groovy Map containing sample information e.g. |
|---|---|
*.xlsm
file
|
Alternative XLSM annotated file (if 'knot_out_xl=true') *.xlsm
|
#2
html
tuple
meta
map
|
Groovy Map containing sample information e.g. |
|---|---|
*.html
file
|
HTML annotated file *.html
|
#3
versions_knotannotsv
tuple
${task.process}
string
|
The name of the process |
|---|---|
knotannotsv
string
|
The name of the tool |
1.1.5
string
|
The expression to obtain the version of the tool |
| Tool | Description | Homepage |
|---|---|---|
| knotannotsv | Simple tool to create a customizable html file (to be displayed on a web browser) from an AnnotSV output | https://github.com/mobidic/knotAnnotSV |
| Version | 0.0.0-071d7b4 |
|---|---|
| Commit ID | 135d883a43b1a2324b4112cd270cf22e20835533 |
| Release Date | 09 Apr 2026 21:15:33 (UTC) |
| Download URL | https://registry-stage.nextflow.io/api/v1/modules/nf-core%2Fknotannotsv/0.0.0-071d7b4/download |
| OCI Store URL | https://public.cr.stage-seqera.io/v2/nextflow/plugin-stage/modules/nf-core/knotannotsv/blobs/sha256:a269578178cf3aa1e3962127bca6d071a9f8046ad6363d2c752d99382d44ca19 |
| Size | 2.8 KB |
| Checksum | sha256:a269578178cf3aa1e3962127bca6d071a9f8046ad6363d2c752d99382d44ca19 |
| Downloads | 1 |
| Version | Date | Status | Downloads | Size | Diff |
|---|---|---|---|---|---|
| 0.0.0-071d7b4 | 09 Apr 2026 21:15:33 (UTC) | 1 | 2.8 KB | - |