nf-core/hostile/fetch @ 0.0.0-0c7146d
Summary
Downloads required reference genomes for Hostile
Get started
Add the following snippet to your workflow script to include this module.
include { HOSTILE_FETCH } from 'nf-core/hostile/fetch'
License
MIT License
Process
Name
|
HOSTILE_FETCH |
|---|
Input
1 channel
index_name
string
|
Name of the reference genome index to download |
|---|
Output
2 channels
#1
versions
versions.yml
file
|
File containing software versions versions.yml
|
|---|
#2
reference
tuple
index_name
directory
|
Name of the reference genome index downloaded |
|---|---|
reference/
directory
|
Directory containing required reference genome files for hostile clean reference/
|
| Tool | Description | Homepage |
|---|---|---|
| hostile | Hostile: accurate host decontamination | https://github.com/bede/hostile |
| Version | 0.0.0-0c7146d |
|---|---|
| Commit ID | 135d883a43b1a2324b4112cd270cf22e20835533 |
| Release Date | 08 Apr 2026 18:48:18 (UTC) |
| Download URL | https://registry-stage.nextflow.io/api/v1/modules/nf-core%2Fhostile%2Ffetch/0.0.0-0c7146d/download |
| OCI Store URL | https://public.cr.stage-seqera.io/v2/nextflow/plugin-stage/modules/nf-core/hostile/fetch/blobs/sha256:8731a8a9bc8010c262a1df7e2da127e656e659275bf61a422ab412917091945d |
| Size | 2.4 KB |
| Checksum | sha256:8731a8a9bc8010c262a1df7e2da127e656e659275bf61a422ab412917091945d |
| Downloads | 1 |
| Version | Date | Status | Downloads | Size | Diff |
|---|---|---|---|---|---|
| 0.0.0-0c7146d | 08 Apr 2026 18:48:18 (UTC) | 1 | 2.4 KB | - |