nf-core/homer/pos2bed @ 0.0.0-0c7146d
Summary
Converting from HOMER peak to BED file formats
Get started
Add the following snippet to your workflow script to include this module.
include { HOMER_POS2BED } from 'nf-core/homer/pos2bed'
License
MIT License
Process
Name
|
HOMER_POS2BED |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
peaks
file
|
Peak file to convert to BED format |
Output
2 channels
#1
bed
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
*.bed
file
|
BED file *.bed
|
#2
versions
versions.yml
file
|
File containing software versions versions.yml
|
|---|
| Tool | Description | Homepage |
|---|---|---|
| homer | HOMER (Hypergeometric Optimization of Motif EnRichment) is a suite of tools for Motif Discovery and next-gen sequencing analysis. | http://homer.ucsd.edu/homer/index.html |
| Version | 0.0.0-0c7146d |
|---|---|
| Commit ID | 135d883a43b1a2324b4112cd270cf22e20835533 |
| Release Date | 08 Apr 2026 18:48:14 (UTC) |
| Download URL | https://registry-stage.nextflow.io/api/v1/modules/nf-core%2Fhomer%2Fpos2bed/0.0.0-0c7146d/download |
| OCI Store URL | https://public.cr.stage-seqera.io/v2/nextflow/plugin-stage/modules/nf-core/homer/pos2bed/blobs/sha256:4b60bb1fd74151d96cad80cc822c892a38c166a86ee437550d8c09f3bd9e3abe |
| Size | 2.6 KB |
| Checksum | sha256:4b60bb1fd74151d96cad80cc822c892a38c166a86ee437550d8c09f3bd9e3abe |
| Downloads | 1 |
| Version | Date | Status | Downloads | Size | Diff |
|---|---|---|---|---|---|
| 0.0.0-0c7146d | 08 Apr 2026 18:48:14 (UTC) | 1 | 2.6 KB | - |