nf-core/homer/makeucscfile @ 0.0.0-0c7146d
Summary
Create a UCSC bed graph with the HOMER suite
Get started
Add the following snippet to your workflow script to include this module.
include { HOMER_MAKEUCSCFILE } from 'nf-core/homer/makeucscfile'
License
MIT License
Process
Name
|
HOMER_MAKEUCSCFILE |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
tagDir
directory
|
The 'Tag Directory' tagDir
|
Output
2 channels
#1
bedGraph
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
*.bedGraph.gz
file
|
The UCSC bed graph *.bedGraph.gz
|
#2
versions
versions.yml
file
|
File containing software versions versions.yml
|
|---|
| Tool | Description | Homepage |
|---|---|---|
| homer | HOMER (Hypergeometric Optimization of Motif EnRichment) is a suite of tools for Motif Discovery and next-gen sequencing analysis. | n/a |
| Version | 0.0.0-0c7146d |
|---|---|
| Commit ID | 135d883a43b1a2324b4112cd270cf22e20835533 |
| Release Date | 08 Apr 2026 18:48:12 (UTC) |
| Download URL | https://registry-stage.nextflow.io/api/v1/modules/nf-core%2Fhomer%2Fmakeucscfile/0.0.0-0c7146d/download |
| OCI Store URL | https://public.cr.stage-seqera.io/v2/nextflow/plugin-stage/modules/nf-core/homer/makeucscfile/blobs/sha256:5b5a3d552854baaef3d5e2ecbf04271d272f49f49fdfef1fa39570cd307d9e25 |
| Size | 2.6 KB |
| Checksum | sha256:5b5a3d552854baaef3d5e2ecbf04271d272f49f49fdfef1fa39570cd307d9e25 |
| Downloads | 1 |
| Version | Date | Status | Downloads | Size | Diff |
|---|---|---|---|---|---|
| 0.0.0-0c7146d | 08 Apr 2026 18:48:12 (UTC) | 1 | 2.6 KB | - |