nf-core/genmod/models @ 0.0.0-0c7146d
Summary
annotate models of inheritance
Get started
Add the following snippet to your workflow script to include this module.
include { GENMOD_MODELS } from 'nf-core/genmod/models'
License
MIT License
Process
Name
|
GENMOD_MODELS |
|---|
Input
2 channels
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
input_vcf
file
|
vcf file *.{vcf}
|
fam
file
|
PED file with family information |
reduced_penetrance
file
|
file with gene ids that have reduced penetrance *.{tsv}
|
|---|
Output
2 channels
#1
vcf
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
*_models.vcf
file
|
Output VCF file *.{vcf}
|
#2
versions_genmod
tuple
${task.process}
string
|
Name of the process |
|---|---|
genmod
string
|
Name of the tool |
genmod --version | sed 's/^.*genmod version: //'
eval
|
The expression to obtain the version of the tool |
| Tool | Description | Homepage |
|---|---|---|
| genmod | Annotate genetic inheritance models in variant files | https://github.com/Clinical-Genomics/genmod |
| Version | 0.0.0-0c7146d |
|---|---|
| Commit ID | e2d3f0ddf4a74a4a9031f3caea2e9deaec5a440b |
| Release Date | 08 Apr 2026 18:44:02 (UTC) |
| Download URL | https://registry-stage.nextflow.io/api/v1/modules/nf-core%2Fgenmod%2Fmodels/0.0.0-0c7146d/download |
| OCI Store URL | https://public.cr.stage-seqera.io/v2/nextflow/plugin-stage/modules/nf-core/genmod/models/blobs/sha256:eb358fa23a837ac98c35a5946230425c2ea1ddb5b5da8298818727ca799d425c |
| Size | 2.5 KB |
| Checksum | sha256:eb358fa23a837ac98c35a5946230425c2ea1ddb5b5da8298818727ca799d425c |
| Downloads | 1 |
| Version | Date | Status | Downloads | Size | Diff |
|---|---|---|---|---|---|
| 0.0.0-e2d3f0d | 28 Apr 2026 21:15:36 (UTC) | 1 | 2.6 KB | ↔ | |
| 0.0.0-0c7146d | 08 Apr 2026 18:44:02 (UTC) | 1 | 2.5 KB | - |