nf-core/ganon/table @ 0.0.0-0c7146d
Summary
Generate a multi-sample report file from the output of ganon report runs
Get started
Add the following snippet to your workflow script to include this module.
include { GANON_TABLE } from 'nf-core/ganon/table'
License
MIT License
Process
Name
|
GANON_TABLE |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
tre
file
|
A list of 'tre' files from ganon report *.tre
|
Output
2 channels
#1
txt
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
*.txt
file
|
Output ganon table containing taxonomic profile information of multiple samples. Formatting of contents depends on --output-format. *.txt
|
#2
versions_ganon
tuple
${task.process}
string
|
The name of the process |
|---|---|
ganon
string
|
The name of the tool |
ganon --version 2>1 | sed 's/.*ganon //g'
eval
|
The expression to obtain the version of the tool |
| Tool | Description | Homepage |
|---|---|---|
| ganon | ganon classifies short DNA sequences against large sets of genomic reference sequences efficiently | https://github.com/pirovc/ganon |
| Version | 0.0.0-0c7146d |
|---|---|
| Commit ID | 135d883a43b1a2324b4112cd270cf22e20835533 |
| Release Date | 08 Apr 2026 18:40:39 (UTC) |
| Download URL | https://registry-stage.nextflow.io/api/v1/modules/nf-core%2Fganon%2Ftable/0.0.0-0c7146d/download |
| OCI Store URL | https://public.cr.stage-seqera.io/v2/nextflow/plugin-stage/modules/nf-core/ganon/table/blobs/sha256:85101634a1570a51d994e97ae7732914f1c2862306e9082bf85a350272d22435 |
| Size | 2.6 KB |
| Checksum | sha256:85101634a1570a51d994e97ae7732914f1c2862306e9082bf85a350272d22435 |
| Downloads | 1 |
| Version | Date | Status | Downloads | Size | Diff |
|---|---|---|---|---|---|
| 0.0.0-0c7146d | 08 Apr 2026 18:40:39 (UTC) | 1 | 2.6 KB | - |