nf-core/fq/lint @ 0.0.0-0c7146d
Summary
fq lint is a FASTQ file pair validator.
Get started
Add the following snippet to your workflow script to include this module.
include { FQ_LINT } from 'nf-core/fq/lint'
License
MIT License
Process
Name
|
FQ_LINT |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
fastq
file
|
FASTQ file list *.fastq{,.gz}
|
Output
2 channels
#1
lint
tuple
meta
file
|
Lint output *.fq_lint.txt
|
|---|---|
*.fq_lint.txt
file
|
Lint output *.fq_lint.txt
|
#2
versions_fq
tuple
${task.process}
string
|
The name of the process |
|---|---|
fq
string
|
The name of the tool |
fq lint --version | sed 's/fq-lint //; s/ .*//'
eval
|
The expression to obtain the version of the tool |
| Tool | Description | Homepage |
|---|---|---|
| fq | fq is a library to generate and validate FASTQ file pairs. | https://github.com/stjude-rust-labs/fq |
| Version | 0.0.0-0c7146d |
|---|---|
| Commit ID | 135d883a43b1a2324b4112cd270cf22e20835533 |
| Release Date | 08 Apr 2026 18:40:01 (UTC) |
| Download URL | https://registry-stage.nextflow.io/api/v1/modules/nf-core%2Ffq%2Flint/0.0.0-0c7146d/download |
| OCI Store URL | https://public.cr.stage-seqera.io/v2/nextflow/plugin-stage/modules/nf-core/fq/lint/blobs/sha256:dd98d91f141d3476841a3e92a8d25166ecae2b7646e60c4579aeb963b31f7d12 |
| Size | 2.1 KB |
| Checksum | sha256:dd98d91f141d3476841a3e92a8d25166ecae2b7646e60c4579aeb963b31f7d12 |
| Downloads | 1 |
| Version | Date | Status | Downloads | Size | Diff |
|---|---|---|---|---|---|
| 0.0.0-0c7146d | 08 Apr 2026 18:40:01 (UTC) | 1 | 2.1 KB | - |