nf-core/ffq @ 0.0.0-0c7146d
Summary
A command line tool that makes it easier to find sequencing data from the SRA / GEO / ENA.
Get started
Add the following snippet to your workflow script to include this module.
include { FFQ } from 'nf-core/ffq'
License
MIT License
Process
Name
|
FFQ |
|---|
Input
1 channel
ids
list
|
List of supported database ids e.g. SRA / GEO / ENA |
|---|
Output
2 channels
#1
json
*.json
file
|
JSON file containing metadata for ids *.{json}
|
|---|
#2
versions_ffq
tuple
${task.process}
string
|
The name of the process |
|---|---|
ffq
string
|
The name of the tool |
ffq --help 2>&1 | sed 's/^.*ffq //; s/: A command.*\$//'
eval
|
The expression to obtain the version of the tool |
| Tool | Description | Homepage |
|---|---|---|
| ffq | A command line tool that makes it easier to find sequencing data from the SRA / GEO / ENA. | https://github.com/pachterlab/ffq |
| Version | 0.0.0-0c7146d |
|---|---|
| Commit ID | e2d3f0ddf4a74a4a9031f3caea2e9deaec5a440b |
| Release Date | 08 Apr 2026 18:39:05 (UTC) |
| Download URL | https://registry-stage.nextflow.io/api/v1/modules/nf-core%2Fffq/0.0.0-0c7146d/download |
| OCI Store URL | https://public.cr.stage-seqera.io/v2/nextflow/plugin-stage/modules/nf-core/ffq/blobs/sha256:d8a46ef1244acb697e48ccf8a1259bdda7fd38b866b886535375fdc905b6c5dc |
| Size | 2.0 KB |
| Checksum | sha256:d8a46ef1244acb697e48ccf8a1259bdda7fd38b866b886535375fdc905b6c5dc |
| Downloads | 1 |
| Version | Date | Status | Downloads | Size | Diff |
|---|---|---|---|---|---|
| 0.0.0-e2d3f0d | 28 Apr 2026 21:15:32 (UTC) | 1 | 2.5 KB | ↔ | |
| 0.0.0-0c7146d | 08 Apr 2026 18:39:05 (UTC) | 1 | 2.0 KB | - |