nf-core/drep/compare @ 0.0.0-e3e0c68
Summary
Performs rapid genome comparisons for a group of genomes and visualize their relatedness
Get started
Add the following snippet to your workflow script to include this module.
include { DREP_COMPARE } from 'nf-core/drep/compare'
License
MIT License
Process
Name
|
DREP_COMPARE |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. |
|---|---|
fastas/*
file
|
List of FASTA files to compare *.{fasta,fa,fna,fas}
|
Output
2 channels
#1
directory
tuple
meta
map
|
Groovy Map containing sample information e.g. |
|---|---|
${prefix}
directory
|
Directory containing output files, such as PDF figures and intermediate tables for use in dRep dereplicate ${prefix}/
|
#2
versions_drep
tuple
${task.process}
string
|
The name of the process |
|---|---|
drep
string
|
The name of the tool |
dRep | sed '2!d;s/.*v//g;s/ .*//g'
eval
|
The expression to obtain the version of the tool |
| Tool | Description | Homepage |
|---|---|---|
| drep | De-replication of microbial genomes assembled from multiple samples | https://drep.readthedocs.io/en/latest/ |
| Version | 0.0.0-e3e0c68 |
|---|---|
| Commit ID | e3e0c687eb5c129c011fca992af762ff2d4cb0f3 |
| Release Date | 27 Apr 2026 21:15:31 (UTC) |
| Download URL | https://registry-stage.nextflow.io/api/v1/modules/nf-core%2Fdrep%2Fcompare/0.0.0-e3e0c68/download |
| OCI Store URL | https://public.cr.stage-seqera.io/v2/nextflow/plugin-stage/modules/nf-core/drep/compare/blobs/sha256:f342fa48c123ba917241ff41104ebb0268747c96fe76f18faa8f123afb0442ab |
| Size | 3.1 KB |
| Checksum | sha256:f342fa48c123ba917241ff41104ebb0268747c96fe76f18faa8f123afb0442ab |
| Downloads | 1 |
| Version | Date | Status | Downloads | Size | Diff |
|---|---|---|---|---|---|
| 0.0.0-e3e0c68 | 27 Apr 2026 21:15:31 (UTC) | 1 | 3.1 KB | ↔ | |
| 0.0.0-0c7146d | 08 Apr 2026 18:35:13 (UTC) | 1 | 2.8 KB | - |