nf-core/custom/catadditionalfasta @ 0.0.0-0c7146d
Summary
Custom module to Add a new fasta file to an old one and update an associated GTF
Get started
Add the following snippet to your workflow script to include this module.
include { CUSTOM_CATADDITIONALFASTA } from 'nf-core/custom/catadditionalfasta'
License
MIT License
Process
Name
|
CUSTOM_CATADDITIONALFASTA |
|---|
Input
3 channels
#1
tuple
meta
map
|
Groovy Map containing fasta information |
|---|---|
fasta
file
|
FASTA-format sequence file *.{fasta,fa}
|
gtf
file
|
GTF-format annotation file for fasta *.gtf
|
#2
tuple
meta2
map
|
Groovy Map containing additional fasta information |
|---|---|
add_fasta
file
|
FASTA-format file of additional sequences *.fa
|
biotype
string
|
Biotype to apply to new GTF entries |
|---|
Output
3 channels
#1
gtf
tuple
meta
map
|
Groovy Map containing fasta information |
|---|---|
out/${prefix}.gtf
file
|
GTF-format combined annotation file *.gtf
|
#2
fasta
tuple
meta
map
|
Groovy Map containing fasta information |
|---|---|
out/${prefix}.fasta
file
|
FASTA-format combined sequence file *.{fasta,fa}
|
#3
versions
versions.yml
file
|
File containing software versions versions.yml
|
|---|
| Tool | Description | Homepage |
|---|---|---|
| custom | Custom module to Add a new fasta file to an old one and update an associated GTF | n/a |
| Version | 0.0.0-0c7146d |
|---|---|
| Commit ID | 135d883a43b1a2324b4112cd270cf22e20835533 |
| Release Date | 08 Apr 2026 18:33:48 (UTC) |
| Download URL | https://registry-stage.nextflow.io/api/v1/modules/nf-core%2Fcustom%2Fcatadditionalfasta/0.0.0-0c7146d/download |
| OCI Store URL | https://public.cr.stage-seqera.io/v2/nextflow/plugin-stage/modules/nf-core/custom/catadditionalfasta/blobs/sha256:fa97d16fa895f0030f18b71d7234e24427422977b9e0ab650e5f8ddf0a7c583d |
| Size | 4.1 KB |
| Checksum | sha256:fa97d16fa895f0030f18b71d7234e24427422977b9e0ab650e5f8ddf0a7c583d |
| Downloads | 1 |
| Version | Date | Status | Downloads | Size | Diff |
|---|---|---|---|---|---|
| 0.0.0-0c7146d | 08 Apr 2026 18:33:48 (UTC) | 1 | 4.1 KB | - |