nf-core/ampcombi2/complete @ 0.0.0-0c7146d
Summary
A submodule that merges all output summary tables from ampcombi/parsetables in one summary file.
Get started
Add the following snippet to your workflow script to include this module.
include { AMPCOMBI2_COMPLETE } from 'nf-core/ampcombi2/complete'
License
MIT License
Process
Name
|
AMPCOMBI2_COMPLETE |
|---|
Input
1 channel
summaries
list
|
The path to the list of files corresponding to each sample as generated by ampcombi2/parsetables. [*_ampcombi.tsv, *_ampcombi.tsv]
|
|---|
Output
3 channels
#1
log
Ampcombi_complete.log
file
|
A log file that captures the standard output for the entire process in a log file. Can be activated by *.log
|
|---|
#2
tsv
Ampcombi_summary.tsv
file
|
A file containing the complete AMPcombi summaries from all processed samples. *.tsv
|
|---|
#3
versions_ampcombi
tuple
${task.process}
string
|
The name of the process |
|---|---|
ampcombi
string
|
The name of the tool |
ampcombi --version | sed 's/ampcombi //'
eval
|
The expression to obtain the version of the tool |
| Tool | Description | Homepage |
|---|---|---|
| ampcombi2/complete | This merges the per sample AMPcombi summaries generated by running 'ampcombi2/parsetables'. | https://github.com/paleobiotechnology/AMPcombi |
| Version | 0.0.0-0c7146d |
|---|---|
| Commit ID | 8098ab9d800821e8b18e17fd515ed1e4ebc523f4 |
| Release Date | 08 Apr 2026 18:21:45 (UTC) |
| Download URL | https://registry-stage.nextflow.io/api/v1/modules/nf-core%2Fampcombi2%2Fcomplete/0.0.0-0c7146d/download |
| OCI Store URL | https://public.cr.stage-seqera.io/v2/nextflow/plugin-stage/modules/nf-core/ampcombi2/complete/blobs/sha256:8989f9ff9192d10a12d80b8b8856a430c262ced0680f377d8bb9d622e54f3098 |
| Size | 2.3 KB |
| Checksum | sha256:8989f9ff9192d10a12d80b8b8856a430c262ced0680f377d8bb9d622e54f3098 |
| Downloads | 1 |
| Version | Date | Status | Downloads | Size | Diff |
|---|---|---|---|---|---|
| 0.0.0-0c7146d | 08 Apr 2026 18:21:45 (UTC) | 1 | 2.3 KB | - |