nf-core/wisecondorx/gender @ 0.0.0-0c7146d
Summary
Returns the gender of a .npz resulting from convert, based on a Gaussian mixture model trained during the newref phase
Get started
Add the following snippet to your workflow script to include this module.
include { WISECONDORX_GENDER } from 'nf-core/wisecondorx/gender'
License
MIT License
Process
Name
|
WISECONDORX_GENDER |
|---|
Input
2 channels
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
npz
file
|
Single sample NPZ file (from which to determine the gender) *.npz
|
#2
tuple
meta2
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
reference
file
|
Reference NPZ file *.npz
|
Output
2 channels
#1
gender
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|
#2
versions_wisecondorx
tuple
${task.process}
string
|
The name of the process |
|---|---|
wisecondorx
string
|
The name of the tool |
pip list |& sed -n 's/wisecondorx *//p'
eval
|
The expression to obtain the version of the tool |
| Tool | Description | Homepage |
|---|---|---|
| wisecondorx | WIthin-SamplE COpy Number aberration DetectOR, including sex chromosomes | https://github.com/CenterForMedicalGeneticsGhent/WisecondorX |
| Version | 0.0.0-0c7146d |
|---|---|
| Commit ID | 135d883a43b1a2324b4112cd270cf22e20835533 |
| Release Date | 08 Apr 2026 19:23:48 (UTC) |
| Download URL | https://registry-stage.nextflow.io/api/v1/modules/nf-core%2Fwisecondorx%2Fgender/0.0.0-0c7146d/download |
| OCI Store URL | https://public.cr.stage-seqera.io/v2/nextflow/plugin-stage/modules/nf-core/wisecondorx/gender/blobs/sha256:10b06881c42816eb6f981de9b7c1355f5acfe2f3a31e41f2a1e9ceea8567fd23 |
| Size | 2.4 KB |
| Checksum | sha256:10b06881c42816eb6f981de9b7c1355f5acfe2f3a31e41f2a1e9ceea8567fd23 |
| Downloads | 1 |
| Version | Date | Status | Downloads | Size | Diff |
|---|---|---|---|---|---|
| 0.0.0-0c7146d | 08 Apr 2026 19:23:48 (UTC) | 1 | 2.4 KB | - |