Nextflow Registry | nf-core/vg/index@0.0.0-0c7146d

nf-core/vg/index @ 0.0.0-0c7146d

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vg index graph structural_variants

Latest version: 0.0.0-0c7146d

Total downloads: 1

Source: nf-core/modules

Authors: @nvnieuwk

Maintainers: @nvnieuwk

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Add the following snippet to your workflow script to include this module.

include { VG_INDEX } from 'nf-core/vg/index'

MIT License

Process

`Name`	`VG_INDEX`

Input 1 channel

#1 tuple

`meta` map	Groovy Map containing sample information e.g. [ id:'test', single_end:false ]
`input` list	One or more input graph files created with `vg/construct` `*.vg`

Output 3 channels

#1 xg tuple

`meta` map	Groovy Map containing sample information e.g. [ id:'test', single_end:false ]
`*.xg` file	File containing a succinct, queryable version of the input graph(s) or read for GCSA or distance indexing `*.xg`

#2 versions

`versions.yml` file	File containing software versions `versions.yml`

#3 vg_index tuple

`meta` map	Groovy Map containing sample information e.g. [ id:'test', single_end:false ]
`*.vgi` file	An index of the graph(s) created when `--index-sorted-vg` is supplied. `*.vgi`

Tool	Description	Homepage
vg	Variation graph data structures, interchange formats, alignment, genotyping, and variant calling methods.	https://github.com/vgteam/vg

Version	0.0.0-0c7146d
Commit ID	135d883a43b1a2324b4112cd270cf22e20835533
Release Date	08 Apr 2026 19:22:36 (UTC)
Download URL	https://registry-stage.nextflow.io/api/v1/modules/nf-core%2Fvg%2Findex/0.0.0-0c7146d/download
OCI Store URL	https://public.cr.stage-seqera.io/v2/nextflow/plugin-stage/modules/nf-core/vg/index/blobs/sha256:0febcad51014ea8a6e183bf5df222a920c13d89339321e73c8e521e99cd7bcbe
Size	2.5 KB
Checksum	sha256:0febcad51014ea8a6e183bf5df222a920c13d89339321e73c8e521e99cd7bcbe
Downloads	1

Version	Date	Status	Downloads	Size	Diff
0.0.0-0c7146d	08 Apr 2026 19:22:36 (UTC)		1	2.5 KB	-