nf-core/vclust/prefilter @ 0.0.0-0c7146d
Summary
The prefilter command creates a pre-alignment filter that reduces the number of genome pairs to be aligned by filtering out dissimilar sequences before the alignment step.
Get started
Add the following snippet to your workflow script to include this module.
include { VCLUST_PREFILTER } from 'nf-core/vclust/prefilter'
License
MIT License
Process
Name
|
VCLUST_PREFILTER |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. |
|---|---|
fasta
file
|
Input fasta file containing sequences needed for filtering *.{fasta,fna,fa}
|
Output
2 channels
#1
txt
tuple
meta
map
|
Groovy Map containing sample information e.g. |
|---|---|
*.txt
file
|
Output text file containing relationships for filtering *.txt
|
#2
versions
versions.yml
file
|
File containing software versions versions.yml
|
|---|
| Tool | Description | Homepage |
|---|---|---|
| vclust | Fast and accurate tool for calculating ANI and clustering virus genomes and metagenomes. | https://afproject.org/vclust/ |
| Version | 0.0.0-0c7146d |
|---|---|
| Commit ID | 135d883a43b1a2324b4112cd270cf22e20835533 |
| Release Date | 08 Apr 2026 19:22:19 (UTC) |
| Download URL | https://registry-stage.nextflow.io/api/v1/modules/nf-core%2Fvclust%2Fprefilter/0.0.0-0c7146d/download |
| OCI Store URL | https://public.cr.stage-seqera.io/v2/nextflow/plugin-stage/modules/nf-core/vclust/prefilter/blobs/sha256:cd47ef741854c81d9b0723fa4a2a0f739d5de61f11c41e9c0ceaa2548e7f43d8 |
| Size | 2.3 KB |
| Checksum | sha256:cd47ef741854c81d9b0723fa4a2a0f739d5de61f11c41e9c0ceaa2548e7f43d8 |
| Downloads | 1 |
| Version | Date | Status | Downloads | Size | Diff |
|---|---|---|---|---|---|
| 0.0.0-0c7146d | 08 Apr 2026 19:22:19 (UTC) | 1 | 2.3 KB | - |