nf-core/vcflib/vcffilter @ 0.0.0-0c7146d
Summary
Command line tools for parsing and manipulating VCF files.
Get started
Add the following snippet to your workflow script to include this module.
include { VCFLIB_VCFFILTER } from 'nf-core/vcflib/vcffilter'
License
MIT License
Process
Name
|
VCFLIB_VCFFILTER |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test_sample_1' ] |
|---|---|
vcf
file
|
VCF file *.{vcf,vcf.gz}
|
tbi
file
|
Index file *.{tbi}
|
Output
2 channels
#1
vcf
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test' ] |
|---|---|
*.vcf.gz
file
|
Filtered VCF file *.{vcf.gz}
|
#2
versions_vcflib
tuple
${task.process}
string
|
The name of the process |
|---|---|
vcflib
string
|
The name of the tool |
1.0.14
string
|
The expression to obtain the version of the tool |
| Tool | Description | Homepage |
|---|---|---|
| vcflib | Command line tools for parsing and manipulating VCF files. | https://github.com/vcflib/vcflib |
| Version | 0.0.0-0c7146d |
|---|---|
| Commit ID | 135d883a43b1a2324b4112cd270cf22e20835533 |
| Release Date | 08 Apr 2026 19:22:05 (UTC) |
| Download URL | https://registry-stage.nextflow.io/api/v1/modules/nf-core%2Fvcflib%2Fvcffilter/0.0.0-0c7146d/download |
| OCI Store URL | https://public.cr.stage-seqera.io/v2/nextflow/plugin-stage/modules/nf-core/vcflib/vcffilter/blobs/sha256:7a840efecbe5bd135acb7ff0e8007c4172b89bcee1dfe47639e95195a572a05e |
| Size | 2.6 KB |
| Checksum | sha256:7a840efecbe5bd135acb7ff0e8007c4172b89bcee1dfe47639e95195a572a05e |
| Downloads | 1 |
| Version | Date | Status | Downloads | Size | Diff |
|---|---|---|---|---|---|
| 0.0.0-0c7146d | 08 Apr 2026 19:22:05 (UTC) | 1 | 2.6 KB | - |