nf-core/truvari/segment @ 0.0.0-0c7146d
Summary
Normalization of SVs into disjointed genomic regions
Get started
Add the following snippet to your workflow script to include this module.
include { TRUVARI_SEGMENT } from 'nf-core/truvari/segment'
License
MIT License
Process
Name
|
TRUVARI_SEGMENT |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. |
|---|---|
vcf
file
|
Input VCF file *.{vcf,gz}
|
Output
2 channels
#1
vcf
tuple
meta
map
|
Groovy Map containing sample information e.g. |
|---|---|
*.vcf
file
|
Segmented VCF file *.{vcf}
|
#2
versions_truvari
tuple
${task.process}
string
|
The process the versions were collected from |
|---|---|
truvari
string
|
The name of the tool |
truvari version | sed 's/Truvari v//'
eval
|
The expression to obtain the version of the tool |
| Tool | Description | Homepage |
|---|---|---|
| truvari | Structural variant comparison tool for VCFs | https://github.com/ACEnglish/truvari |
| Version | 0.0.0-0c7146d |
|---|---|
| Commit ID | 135d883a43b1a2324b4112cd270cf22e20835533 |
| Release Date | 08 Apr 2026 19:20:13 (UTC) |
| Download URL | https://registry-stage.nextflow.io/api/v1/modules/nf-core%2Ftruvari%2Fsegment/0.0.0-0c7146d/download |
| OCI Store URL | https://public.cr.stage-seqera.io/v2/nextflow/plugin-stage/modules/nf-core/truvari/segment/blobs/sha256:be4fcea4a16af8ec574f4f2e8ec1b4d3c016c538ba7274135c4d3d8e933b0f32 |
| Size | 2.3 KB |
| Checksum | sha256:be4fcea4a16af8ec574f4f2e8ec1b4d3c016c538ba7274135c4d3d8e933b0f32 |
| Downloads | 1 |
| Version | Date | Status | Downloads | Size | Diff |
|---|---|---|---|---|---|
| 0.0.0-0c7146d | 08 Apr 2026 19:20:13 (UTC) | 1 | 2.3 KB | - |