nf-core/spring/decompress @ 0.0.0-0c7146d
Summary
Fast, efficient, lossless decompression of FASTQ files.
Get started
Add the following snippet to your workflow script to include this module.
include { SPRING_DECOMPRESS } from 'nf-core/spring/decompress'
License
MIT License
Process
Name
|
SPRING_DECOMPRESS |
|---|
Input
2 channels
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
spring
file
|
Spring file to decompress. *.{spring}
|
write_one_fastq_gz
boolean
|
Controls whether spring should write one fastq.gz file with reads from both directions or two fastq.gz files with reads from distinct directions true or false
|
|---|
Output
2 channels
#1
fastq
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
*.fastq.gz
file
|
Decompressed FASTQ file(s). *.{fastq.gz}
|
#2
versions_spring
tuple
${task.process}
string
|
The name of the process |
|---|---|
spring
string
|
The name of the tool |
1.1.1
string
|
The expression to obtain the version of the tool |
| Tool | Description | Homepage |
|---|---|---|
| spring | SPRING is a compression tool for Fastq files (containing up to 4.29 Billion reads) | https://github.com/shubhamchandak94/Spring |
| Version | 0.0.0-0c7146d |
|---|---|
| Commit ID | 135d883a43b1a2324b4112cd270cf22e20835533 |
| Release Date | 08 Apr 2026 19:16:13 (UTC) |
| Download URL | https://registry-stage.nextflow.io/api/v1/modules/nf-core%2Fspring%2Fdecompress/0.0.0-0c7146d/download |
| OCI Store URL | https://public.cr.stage-seqera.io/v2/nextflow/plugin-stage/modules/nf-core/spring/decompress/blobs/sha256:6cb01b64d2d9008c3b2a89a1dbb2b40d12185f1f6ec2082dc6edab7f0862d74f |
| Size | 2.8 KB |
| Checksum | sha256:6cb01b64d2d9008c3b2a89a1dbb2b40d12185f1f6ec2082dc6edab7f0862d74f |
| Downloads | 1 |
| Version | Date | Status | Downloads | Size | Diff |
|---|---|---|---|---|---|
| 0.0.0-0c7146d | 08 Apr 2026 19:16:13 (UTC) | 1 | 2.8 KB | - |