nf-core/slimfastq @ 0.0.0-0c7146d
Summary
Fast, efficient, lossless compression of FASTQ files.
Get started
Add the following snippet to your workflow script to include this module.
include { SLIMFASTQ } from 'nf-core/slimfastq'
License
MIT License
Process
Name
|
SLIMFASTQ |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
fastq
file
|
Either a single-end FASTQ file or paired-end files. *.{fq.gz,fastq.gz}
|
Output
2 channels
#1
sfq
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
*.sfq
file
|
Either one or two sequence files in slimfastq compressed format. *.{sfq}
|
#2
versions
versions.yml
file
|
File containing software versions versions.yml
|
|---|
| Tool | Description | Homepage |
|---|---|---|
| slimfastq | slimfastq efficiently compresses/decompresses FASTQ files | https://github.com/Infinidat/slimfastq |
| Version | 0.0.0-0c7146d |
|---|---|
| Commit ID | 135d883a43b1a2324b4112cd270cf22e20835533 |
| Release Date | 08 Apr 2026 19:15:02 (UTC) |
| Download URL | https://registry-stage.nextflow.io/api/v1/modules/nf-core%2Fslimfastq/0.0.0-0c7146d/download |
| OCI Store URL | https://public.cr.stage-seqera.io/v2/nextflow/plugin-stage/modules/nf-core/slimfastq/blobs/sha256:eabe938ee174c18cc45b73c1fc7a979ec3e7ad1f59745487aab365b5e04352de |
| Size | 2.4 KB |
| Checksum | sha256:eabe938ee174c18cc45b73c1fc7a979ec3e7ad1f59745487aab365b5e04352de |
| Downloads | 1 |
| Version | Date | Status | Downloads | Size | Diff |
|---|---|---|---|---|---|
| 0.0.0-0c7146d | 08 Apr 2026 19:15:02 (UTC) | 1 | 2.4 KB | - |