nf-core/seqfu/stats @ 0.0.0-0c7146d
Summary
Statistics for FASTA or FASTQ files
Get started
Add the following snippet to your workflow script to include this module.
include { SEQFU_STATS } from 'nf-core/seqfu/stats'
License
MIT License
Process
Name
|
SEQFU_STATS |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. |
|---|---|
files
file
|
One or more FASTA or FASTQ files *.{fasta,fastq,fasta.gz,fastq.gz,fq,fq.gz}
|
Output
3 channels
#1
stats
tuple
meta
map
|
Groovy Map containing sample information e.g. |
|---|---|
*.tsv
file
|
Tab-separated output file with basic sequence statistics. *.{tsv}
|
#2
multiqc
tuple
meta
map
|
Groovy Map containing sample information e.g. |
|---|---|
*_mqc.txt
file
|
MultiQC ready table *.{_mqc.txt}
|
#3
versions_seqfu
tuple
${task.process}
string
|
The name of the process |
|---|---|
seqfu
string
|
The name of the tool |
seqfu version
eval
|
The expression to obtain the version of the tool |
| Tool | Description | Homepage |
|---|---|---|
| seqfu | Cross-platform compiled suite of tools to manipulate and inspect FASTA and FASTQ files | https://telatin.github.io/seqfu2/ |
| Version | 0.0.0-0c7146d |
|---|---|
| Commit ID | 135d883a43b1a2324b4112cd270cf22e20835533 |
| Release Date | 08 Apr 2026 19:12:34 (UTC) |
| Download URL | https://registry-stage.nextflow.io/api/v1/modules/nf-core%2Fseqfu%2Fstats/0.0.0-0c7146d/download |
| OCI Store URL | https://public.cr.stage-seqera.io/v2/nextflow/plugin-stage/modules/nf-core/seqfu/stats/blobs/sha256:a75de93c3cdd96e06bd4948f71c13e2227f489e04ad008228d0f71e8be4cf626 |
| Size | 2.5 KB |
| Checksum | sha256:a75de93c3cdd96e06bd4948f71c13e2227f489e04ad008228d0f71e8be4cf626 |
| Downloads | 1 |
| Version | Date | Status | Downloads | Size | Diff |
|---|---|---|---|---|---|
| 0.0.0-0c7146d | 08 Apr 2026 19:12:34 (UTC) | 1 | 2.5 KB | - |