Nextflow Registry | nf-core/seqfu/check@0.0.0-0c7146d

nf-core/seqfu/check @ 0.0.0-0c7146d

Evaluates the integrity of DNA FASTQ files

check seqfu fastq

Latest version: 0.0.0-0c7146d

Total downloads: 1

Source: nf-core/modules

Authors: @kornkv @mrozon-zip

Maintainers: @kornkv @mrozon-zip @vagkaratzas

Evaluates the integrity of DNA FASTQ files

Add the following snippet to your workflow script to include this module.

include { SEQFU_CHECK } from 'nf-core/seqfu/check'

MIT License

Process

`Name`	`SEQFU_CHECK`

Input 1 channel

#1 tuple

`meta` map	Groovy Map containing sample information. e.g. `[ id:'sample1' ]`
`reads` file	Either fastq file(s) or directory containing fastq files to be checked `*.{fq,fastq}[.gz]`

Output 2 channels

#1 check tuple

`meta` map	Groovy Map containing sample information. e.g. `[ id:'sample1' ]`
`${prefix}.tsv` file	Tab-separated output file with basic sequence statistics. `*.tsv`

#2 versions_seqfu tuple

`${task.process}` string	The name of the process
`seqfu` string	The name of the tool
`seqfu version` eval	The expression to obtain the version of the tool

Tool	Description	Homepage
seqfu	A general-purpose program to manipulate and parse information from FASTQ files	https://telatin.github.io/seqfu2/

Version	0.0.0-0c7146d
Commit ID	135d883a43b1a2324b4112cd270cf22e20835533
Release Date	08 Apr 2026 19:12:30 (UTC)
Download URL	https://registry-stage.nextflow.io/api/v1/modules/nf-core%2Fseqfu%2Fcheck/0.0.0-0c7146d/download
OCI Store URL	https://public.cr.stage-seqera.io/v2/nextflow/plugin-stage/modules/nf-core/seqfu/check/blobs/sha256:6bf6c9f85e0ad98892914b37f98c9b132ad116dc8493577b11ca887154b1e159
Size	2.6 KB
Checksum	sha256:6bf6c9f85e0ad98892914b37f98c9b132ad116dc8493577b11ca887154b1e159
Downloads	1

Version	Date	Status	Downloads	Size	Diff
0.0.0-0c7146d	08 Apr 2026 19:12:30 (UTC)		1	2.6 KB	-