nf-core/rrnatranscripts @ 0.0.0-0c7146d
Summary
Ribosomal RNA extraction from a GTF file.
Get started
Add the following snippet to your workflow script to include this module.
include { RRNATRANSCRIPTS } from 'nf-core/rrnatranscripts'
License
MIT License
Process
Name
|
RRNATRANSCRIPTS |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
gtf
file
|
GTF file *.{gtf}
|
Output
2 channels
#1
rrna_gtf
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
*_rrna_intervals.gtf
file
|
Output GTF file containing ribosomal RNA intervals *_rrna_intervals.gtf
|
#2
versions
versions.yml
file
|
File containing software versions versions.yml
|
|---|
| Tool | Description | Homepage |
|---|---|---|
| rrnatranscripts | Extraction of ribosomal RNA | https://github.com/nf-core/rnafusion |
| Version | 0.0.0-0c7146d |
|---|---|
| Commit ID | 135d883a43b1a2324b4112cd270cf22e20835533 |
| Release Date | 08 Apr 2026 19:08:24 (UTC) |
| Download URL | https://registry-stage.nextflow.io/api/v1/modules/nf-core%2Frrnatranscripts/0.0.0-0c7146d/download |
| OCI Store URL | https://public.cr.stage-seqera.io/v2/nextflow/plugin-stage/modules/nf-core/rrnatranscripts/blobs/sha256:794971e55f4514baa7784c1883c43518c9bbc8c758658e49e399c5e2f4f5da0c |
| Size | 2.9 KB |
| Checksum | sha256:794971e55f4514baa7784c1883c43518c9bbc8c758658e49e399c5e2f4f5da0c |
| Downloads | 1 |
| Version | Date | Status | Downloads | Size | Diff |
|---|---|---|---|---|---|
| 0.0.0-0c7146d | 08 Apr 2026 19:08:24 (UTC) | 1 | 2.9 KB | - |