nf-core/rastair/methylkit @ 0.0.0-e2d3f0d
Summary
Parses rastair call output and converts it into a MethylKit-compatible format.
Get started
Add the following snippet to your workflow script to include this module.
include { RASTAIR_METHYLKIT } from 'nf-core/rastair/methylkit'
License
MIT License
Process
Name
|
RASTAIR_METHYLKIT |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
rastair_call_txt
file
|
Text file from *.rastair_call.txt
|
Output
2 channels
#1
versions
versions.yml
file
|
File containing software versions versions.yml
|
|---|
#2
methylkit
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
*methylkit.txt.gz
file
|
Gzipped text file in MethylKit format. *methylkit.txt.gz
|
| Tool | Description | Homepage |
|---|---|---|
| rastair | A tool for rapid genome-wide assessment of C->T conversion as a readout for methylation. The module uses a script bundled with Rastair to convert formats. | https://bitbucket.org/bsblabludwig/rastair/src/master/ |
| Version | 0.0.0-e2d3f0d |
|---|---|
| Commit ID | e2d3f0ddf4a74a4a9031f3caea2e9deaec5a440b |
| Release Date | 28 Apr 2026 21:15:54 (UTC) |
| Download URL | https://registry-stage.nextflow.io/api/v1/modules/nf-core%2Frastair%2Fmethylkit/0.0.0-e2d3f0d/download |
| OCI Store URL | https://public.cr.stage-seqera.io/v2/nextflow/plugin-stage/modules/nf-core/rastair/methylkit/blobs/sha256:63a7b0c1165b211dc89cb0a2bfc7940f4e7076f2f24239d0a58ead88e73d8b48 |
| Size | 2.4 KB |
| Checksum | sha256:63a7b0c1165b211dc89cb0a2bfc7940f4e7076f2f24239d0a58ead88e73d8b48 |
| Downloads | 1 |
| Version | Date | Status | Downloads | Size | Diff |
|---|---|---|---|---|---|
| 0.0.0-e2d3f0d | 28 Apr 2026 21:15:54 (UTC) | 1 | 2.4 KB | ↔ | |
| 0.0.0-0c7146d | 08 Apr 2026 19:06:57 (UTC) | 1 | 2.4 KB | - |