nf-core/pydamage/analyze @ 0.0.0-0c7146d
Summary
Damage parameter estimation for ancient DNA
Get started
Add the following snippet to your workflow script to include this module.
include { PYDAMAGE_ANALYZE } from 'nf-core/pydamage/analyze'
License
MIT License
Process
Name
|
PYDAMAGE_ANALYZE |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
bam
file
|
BAM/CRAM/SAM file *.{bam,cram,sam}
|
bai
file
|
BAM/CRAM/SAM index file *.{bai,crai,sai}
|
Output
2 channels
#1
csv
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
${prefix}_pydamage_results.csv
file
|
PyDamage results as csv files *.csv
|
#2
versions
versions.yml
file
|
File containing software versions versions.yml
|
|---|
| Tool | Description | Homepage |
|---|---|---|
| pydamage | Damage parameter estimation for ancient DNA | https://github.com/maxibor/pydamage |
| Version | 0.0.0-0c7146d |
|---|---|
| Commit ID | 135d883a43b1a2324b4112cd270cf22e20835533 |
| Release Date | 08 Apr 2026 19:06:04 (UTC) |
| Download URL | https://registry-stage.nextflow.io/api/v1/modules/nf-core%2Fpydamage%2Fanalyze/0.0.0-0c7146d/download |
| OCI Store URL | https://public.cr.stage-seqera.io/v2/nextflow/plugin-stage/modules/nf-core/pydamage/analyze/blobs/sha256:5207b3edcd7657880dc4223c77dfd7f9303c330662f13ac2c0ee3bd1c8c22410 |
| Size | 2.4 KB |
| Checksum | sha256:5207b3edcd7657880dc4223c77dfd7f9303c330662f13ac2c0ee3bd1c8c22410 |
| Downloads | 1 |
| Version | Date | Status | Downloads | Size | Diff |
|---|---|---|---|---|---|
| 0.0.0-0c7146d | 08 Apr 2026 19:06:04 (UTC) | 1 | 2.4 KB | - |