Nextflow Registry | nf-core/paraclu@0.0.0-0c7146d

nf-core/paraclu @ 0.0.0-0c7146d

Paraclu finds clusters in data attached to sequences.

sort cluster bed

Latest version: 0.0.0-0c7146d

Total downloads: 1

Source: nf-core/modules

Authors: @mashehu

Maintainers: @mashehu

Paraclu finds clusters in data attached to sequences.

Add the following snippet to your workflow script to include this module.

include { PARACLU } from 'nf-core/paraclu'

MIT License

Process

`Name`	`PARACLU`

Input 2 channels

#1 tuple

`meta` map	Groovy Map containing sample information e.g. [ id:'test', single_end:false ]
`bed` file	BED file `*.bed`

`min_cluster` integer	Minimum size of cluster `*.bed`

Output 2 channels

#1 bed tuple

`meta` map	Groovy Map containing sample information e.g. [ id:'test', single_end:false ]
`*.bed` file	clustered BED file `*.bed`

#2 versions

`versions.yml` file	File containing software versions `versions.yml`

Tool	Description	Homepage
paraclu	Paraclu finds clusters in data attached to sequences.	https://gitlab.com/mcfrith/paraclu

Version	0.0.0-0c7146d
Commit ID	135d883a43b1a2324b4112cd270cf22e20835533
Release Date	08 Apr 2026 19:01:19 (UTC)
Download URL	https://registry-stage.nextflow.io/api/v1/modules/nf-core%2Fparaclu/0.0.0-0c7146d/download
OCI Store URL	https://public.cr.stage-seqera.io/v2/nextflow/plugin-stage/modules/nf-core/paraclu/blobs/sha256:cd7fe38eae89d92d857d50a61f2a4c61e5cc55da190f8340d89b60390c5b3b92
Size	2.3 KB
Checksum	sha256:cd7fe38eae89d92d857d50a61f2a4c61e5cc55da190f8340d89b60390c5b3b92
Downloads	1

Version	Date	Status	Downloads	Size	Diff
0.0.0-0c7146d	08 Apr 2026 19:01:19 (UTC)		1	2.3 KB	-