Nextflow Registry | nf-core/panacus/visualize@0.0.0-0c7146d

nf-core/panacus/visualize @ 0.0.0-0c7146d

Create visualizations from a tsv coverage histogram created with panacus.

statistics pangenome graph visualization tsv genomics

Latest version: 0.0.0-0c7146d

Total downloads: 1

Source: nf-core/modules

Authors: @heringerp

Maintainers: @heringerp @subwaystation

Create visualizations from a tsv coverage histogram created with panacus.

Add the following snippet to your workflow script to include this module.

include { PANACUS_VISUALIZE } from 'nf-core/panacus/visualize'

MIT License

Process

`Name`	`PANACUS_VISUALIZE`

Input 1 channel

#1 tuple

`meta` map	Groovy Map containing sample information e.g. `[ id:'test', single_end:false ]`
`tsv` file	TSV coverage histogram created with panacus histgrowth `*.tsv`

Output 2 channels

#1 image tuple

`meta` map	Groovy Map containing sample information e.g. `[ id:'test', single_end:false ]`
`*.{eps,jpg,jpeg,pdf,pgf,png,ps,raw,rgba,svg,svgz,tif,tiff,webp}` file	Visualizations created from the coverage histogram `*.{eps,jpg,jpeg,pdf,pgf,png,ps,raw,rgba,svg,svgz,tif,tiff,webp}`

#2 versions

`versions.yml` file	File containing software versions `versions.yml`

Tool	Description	Homepage
panacus	panacus is a tool for computing counting statistics for GFA files	https://github.com/marschall-lab/panacus

Version	0.0.0-0c7146d
Commit ID	135d883a43b1a2324b4112cd270cf22e20835533
Release Date	08 Apr 2026 19:00:51 (UTC)
Download URL	https://registry-stage.nextflow.io/api/v1/modules/nf-core%2Fpanacus%2Fvisualize/0.0.0-0c7146d/download
OCI Store URL	https://public.cr.stage-seqera.io/v2/nextflow/plugin-stage/modules/nf-core/panacus/visualize/blobs/sha256:d4aeaad19e63e496a194638eeb37a8f91bd13a5234789c88fe518472cc3419e0
Size	2.2 KB
Checksum	sha256:d4aeaad19e63e496a194638eeb37a8f91bd13a5234789c88fe518472cc3419e0
Downloads	1

Version	Date	Status	Downloads	Size	Diff
0.0.0-0c7146d	08 Apr 2026 19:00:51 (UTC)		1	2.2 KB	-